Analysis of interatomic Contacts of Structural Units in PDB entry:
4N4G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N4G entry

There is 1 chain in PDB entry 4N4G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 154LYS 366
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 4N4G. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
154 172Right-handed alpha
Helix 2
2
A
187 192Right-handed alpha
Helix 3
3
A
197 207Right-handed alpha
Helix 4
4
A
212 232Right-handed alpha
Helix 5
5
A
235 258Right-handed alpha
Helix 6
6
A
258 268Right-handed alpha
Helix 7
7
A
271 275Right-handed 310
Helix 8
8
A
312 315Right-handed 310
Helix 9
9
A
340 360Right-handed alpha
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There is 1 sheet ( A) in PDB entry 4N4G.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
317 321first strand
Strand 2
A
305 310anti-parallel
Strand 3
A
293 302anti-parallel
Strand 4
A
283 287anti-parallel
Strand 5
A
325 327anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il