Analysis of interatomic Contacts of Structural Units in PDB entry:
4N5Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N5Y entry

There are 30 chains in PDB entry 4N5Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 8PRO 324
C
 ASP 8PRO 324
E
 ASP 8PRO 324
G
 ASP 8PRO 324
I
 ASP 8PRO 324
K
 ASP 8PRO 324
M
 ASP 8PRO 324
O
 ASP 8PRO 324
Q
 ASP 8PRO 324
S
 ASP 8PRO 324
U
 ASP 8PRO 324
W
 ASP 8PRO 324
Y
 ASP 8PRO 324
a
 ASP 8PRO 324
c
 ASP 8PRO 324
B
 GLY 1ARG 177
D
 GLY 1ARG 177
F
 GLY 1ARG 177
H
 GLY 1ARG 177
J
 GLY 1ARG 177
L
 GLY 1ARG 177
N
 GLY 1ARG 177
P
 GLY 1ARG 177
R
 GLY 1ARG 177
T
 GLY 1ARG 177
V
 GLY 1ARG 177
X
 GLY 1ARG 177
Z
 GLY 1ARG 177
b
 GLY 1ARG 177
d
 GLY 1ARG 177
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are146 helices in PDB entry 4N5Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
65 72Right-handed alpha
Helix 2
2
A
73 80Right-handed 310
Helix 3
3
A
104 112Right-handed alpha
Helix 4
4
A
125 127Right-handed 310
Helix 5
5
A
187 196Right-handed alpha
Helix 6
6
C
65 72Right-handed alpha
Helix 7
7
C
73 80Right-handed 310
Helix 8
8
C
104 113Right-handed alpha
Helix 9
9
C
125 127Right-handed 310
Helix 10
10
C
131 134Right-handed 310
Helix 11
11
C
187 196Right-handed alpha
Helix 12
12
E
65 72Right-handed alpha
Helix 13
13
E
73 80Right-handed 310
Helix 14
14
E
104 113Right-handed alpha
Helix 15
15
E
125 127Right-handed 310
Helix 16
16
E
187 196Right-handed alpha
Helix 17
17
G
65 72Right-handed alpha
Helix 18
18
G
73 80Right-handed 310
Helix 19
19
G
104 113Right-handed alpha
Helix 20
20
G
125 127Right-handed 310
Helix 21
21
G
131 134Right-handed 310
Helix 22
22
G
187 196Right-handed alpha
Helix 23
23
I
65 72Right-handed alpha
Helix 24
24
I
73 80Right-handed 310
Helix 25
25
I
104 112Right-handed alpha
Helix 26
26
I
125 127Right-handed 310
Helix 27
27
I
131 134Right-handed 310
Helix 28
28
I
187 196Right-handed alpha
Helix 29
29
K
65 72Right-handed alpha
Helix 30
30
K
73 80Right-handed 310
Helix 31
31
K
104 113Right-handed alpha
Helix 32
32
K
125 127Right-handed 310
Helix 33
33
K
131 134Right-handed 310
Helix 34
34
K
187 196Right-handed alpha
Helix 35
35
M
65 72Right-handed alpha
Helix 36
36
M
73 80Right-handed 310
Helix 37
37
M
104 113Right-handed alpha
Helix 38
38
M
125 127Right-handed 310
Helix 39
39
M
131 134Right-handed 310
Helix 40
40
M
187 196Right-handed alpha
Helix 41
41
O
65 72Right-handed alpha
Helix 42
42
O
73 80Right-handed 310
Helix 43
43
O
104 113Right-handed alpha
Helix 44
44
O
125 127Right-handed 310
Helix 45
45
O
131 134Right-handed 310
Helix 46
46
O
187 196Right-handed alpha
Helix 47
47
Q
65 72Right-handed alpha
Helix 48
48
Q
73 80Right-handed 310
Helix 49
49
Q
104 113Right-handed alpha
Helix 50
50
Q
125 127Right-handed 310
Helix 51
51
Q
187 196Right-handed alpha
Helix 52
52
S
65 72Right-handed alpha
Helix 53
53
S
73 77Right-handed 310
Helix 54
54
S
104 113Right-handed alpha
Helix 55
55
S
125 127Right-handed 310
Helix 56
56
S
131 134Right-handed 310
Helix 57
57
S
187 195Right-handed alpha
Helix 58
58
U
65 72Right-handed alpha
Helix 59
59
U
73 80Right-handed 310
Helix 60
60
U
104 113Right-handed alpha
Helix 61
61
U
125 127Right-handed 310
Helix 62
62
U
131 134Right-handed 310
Helix 63
63
U
187 196Right-handed alpha
Helix 64
64
W
65 72Right-handed alpha
Helix 65
65
W
73 77Right-handed 310
Helix 66
66
W
104 113Right-handed alpha
Helix 67
67
W
125 127Right-handed 310
Helix 68
68
W
131 134Right-handed 310
Helix 69
69
W
187 196Right-handed alpha
Helix 70
70
Y
65 72Right-handed alpha
Helix 71
71
Y
73 80Right-handed 310
Helix 72
72
Y
104 113Right-handed alpha
Helix 73
73
Y
125 127Right-handed 310
Helix 74
74
Y
131 134Right-handed 310
Helix 75
75
Y
187 196Right-handed alpha
Helix 76
76
a
65 72Right-handed alpha
Helix 77
77
a
73 80Right-handed 310
Helix 78
78
a
104 113Right-handed alpha
Helix 79
79
a
125 127Right-handed 310
Helix 80
80
a
131 134Right-handed 310
Helix 81
81
a
187 196Right-handed alpha
Helix 82
82
c
65 72Right-handed alpha
Helix 83
83
c
73 80Right-handed 310
Helix 84
84
c
104 113Right-handed alpha
Helix 85
85
c
125 127Right-handed 310
Helix 86
86
c
187 196Right-handed alpha
Helix 87
87
B
37 59Right-handed alpha
Helix 88
88
B
74 127Right-handed alpha
Helix 89
89
B
145 154Right-handed alpha
Helix 90
90
B
158 176Right-handed alpha
Helix 91
91
D
37 59Right-handed alpha
Helix 92
92
D
74 127Right-handed alpha
Helix 93
93
D
145 154Right-handed alpha
Helix 94
94
D
158 175Right-handed alpha
Helix 95
95
F
37 59Right-handed alpha
Helix 96
96
F
74 127Right-handed alpha
Helix 97
97
F
145 154Right-handed alpha
Helix 98
98
F
158 176Right-handed alpha
Helix 99
99
H
37 59Right-handed alpha
Helix 100
100
H
74 127Right-handed alpha
Helix 101
101
H
145 154Right-handed alpha
Helix 102
102
H
158 176Right-handed alpha
Helix 103
103
J
37 59Right-handed alpha
Helix 104
104
J
74 127Right-handed alpha
Helix 105
105
J
145 154Right-handed alpha
Helix 106
106
J
158 176Right-handed alpha
Helix 107
107
L
37 59Right-handed alpha
Helix 108
108
L
74 127Right-handed alpha
Helix 109
109
L
145 154Right-handed alpha
Helix 110
110
L
158 176Right-handed alpha
Helix 111
111
N
37 59Right-handed alpha
Helix 112
112
N
74 127Right-handed alpha
Helix 113
113
N
145 154Right-handed alpha
Helix 114
114
N
158 176Right-handed alpha
Helix 115
115
P
37 59Right-handed alpha
Helix 116
116
P
74 127Right-handed alpha
Helix 117
117
P
145 155Right-handed alpha
Helix 118
118
P
158 176Right-handed alpha
Helix 119
119
R
37 59Right-handed alpha
Helix 120
120
R
74 127Right-handed alpha
Helix 121
121
R
145 154Right-handed alpha
Helix 122
122
R
158 175Right-handed alpha
Helix 123
123
T
37 59Right-handed alpha
Helix 124
124
T
74 127Right-handed alpha
Helix 125
125
T
145 154Right-handed alpha
Helix 126
126
T
158 175Right-handed alpha
Helix 127
127
V
37 59Right-handed alpha
Helix 128
128
V
74 127Right-handed alpha
Helix 129
129
V
145 154Right-handed alpha
Helix 130
130
V
158 175Right-handed alpha
Helix 131
131
X
37 59Right-handed alpha
Helix 132
132
X
74 127Right-handed alpha
Helix 133
133
X
145 154Right-handed alpha
Helix 134
134
X
158 176Right-handed alpha
Helix 135
135
Z
37 59Right-handed alpha
Helix 136
136
Z
74 127Right-handed alpha
Helix 137
137
Z
145 154Right-handed alpha
Helix 138
138
Z
158 176Right-handed alpha
Helix 139
139
b
37 59Right-handed alpha
Helix 140
140
b
74 127Right-handed alpha
Helix 141
141
b
145 154Right-handed alpha
Helix 142
142
b
158 176Right-handed alpha
Helix 143
143
d
37 59Right-handed alpha
Helix 144
144
d
74 127Right-handed alpha
Helix 145
145
d
145 154Right-handed alpha
Helix 146
146
d
158 176Right-handed alpha
Back to top of page