Analysis of interatomic Contacts of Structural Units in PDB entry:
4N72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N72 entry

There are 3 chains in PDB entry 4N72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 383VAL 628
B
 PRO 383LEU 627
C
 PRO 383MET 629
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 4N72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
392 396Right-handed 310
Helix 2
2
A
405 422Right-handed alpha
Helix 3
3
A
433 447Right-handed alpha
Helix 4
4
A
457 473Right-handed alpha
Helix 5
5
A
474 476Right-handed 310
Helix 6
6
A
512 516Right-handed 310
Helix 7
7
A
517 535Right-handed alpha
Helix 8
8
A
538 543Right-handed 310
Helix 9
9
A
606 622Right-handed alpha
Helix 10
10
A
623 628Right-handed alpha
Helix 11
11
B
392 396Right-handed 310
Helix 12
12
B
405 422Right-handed alpha
Helix 13
13
B
433 450Right-handed alpha
Helix 14
14
B
457 473Right-handed alpha
Helix 15
15
B
474 476Right-handed 310
Helix 16
16
B
517 534Right-handed alpha
Helix 17
17
B
539 543Right-handed 310
Helix 18
18
B
606 623Right-handed alpha
Helix 19
19
B
624 627Right-handed 310
Helix 20
20
C
392 396Right-handed 310
Helix 21
21
C
405 422Right-handed alpha
Helix 22
22
C
433 450Right-handed alpha
Helix 23
23
C
457 473Right-handed alpha
Helix 24
24
C
474 476Right-handed 310
Helix 25
25
C
513 516Right-handed 310
Helix 26
26
C
517 535Right-handed alpha
Helix 27
27
C
538 543Right-handed 310
Helix 28
28
C
606 622Right-handed alpha
Helix 29
29
C
623 627Right-handed 310
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There are 12 sheets in PDB entry 4N72. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
399 403first strand
Strand 2
C
486 490anti-parallel
Strand 3
C
478 480anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 510first strand
Strand 2
A
495 497anti-parallel
Strand 3
A
547 551parallel
Strand 4
A
570 574parallel
Strand 5
A
588 601anti-parallel
Strand 6
A
578 583anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
509 510first strand
Strand 2
A
495 497anti-parallel
Strand 3
A
547 551parallel
Strand 4
A
570 574parallel
Strand 5
A
588 601anti-parallel
Strand 6
A
424 432anti-parallel
Strand 7
B
559 561anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 480first strand
Strand 2
A
486 490anti-parallel
Strand 3
B
399 403anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
499 501first strand
Strand 2
A
504 506anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
559 561first strand
Strand 2
C
424 432anti-parallel
Strand 3
C
588 601anti-parallel
Strand 4
C
570 574anti-parallel
Strand 5
C
547 551parallel
Strand 6
C
494 497parallel
Strand 7
C
509 511anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
559 561first strand
Strand 2
C
424 432anti-parallel
Strand 3
C
588 601anti-parallel
Strand 4
C
578 583anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
509 510first strand
Strand 2
B
495 497anti-parallel
Strand 3
B
547 551parallel
Strand 4
B
570 574parallel
Strand 5
B
588 601anti-parallel
Strand 6
B
578 583anti-parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
509 510first strand
Strand 2
B
495 497anti-parallel
Strand 3
B
547 551parallel
Strand 4
B
570 574parallel
Strand 5
B
588 601anti-parallel
Strand 6
B
424 432anti-parallel
Strand 7
C
559 561anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
478 480first strand
Strand 2
B
486 490anti-parallel
Strand 3
C
399 403anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
499 501first strand
Strand 2
B
504 506anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
499 501first strand
Strand 2
C
504 506anti-parallel
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