Analysis of interatomic Contacts of Structural Units in PDB entry:
4N7Z


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N7Z entry

There are 2 chains in PDB entry 4N7Z (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 586LYS 806
B
 ASP 214GLU 242
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 5 helices in PDB entry 4N7Z. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
586 590Right-handed 310
Helix 2
2
A
676 678Right-handed 310
Helix 3
3
A
679 698Right-handed alpha
Helix 4
4
A
762 794Right-handed alpha
Helix 5
5
B
224 235Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 4N7Z. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
602 605first strand
Strand 2
A
609 613anti-parallel
Strand 3
A
619 627anti-parallel
Strand 4
A
630 639anti-parallel
Strand 5
A
657 658anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
602 605first strand
Strand 2
A
609 613anti-parallel
Strand 3
A
619 627anti-parallel
Strand 4
A
630 639anti-parallel
Strand 5
A
645 649anti-parallel
Strand 6
A
671 674anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
749 752first strand
Strand 2
A
740 743anti-parallel
Strand 3
A
732 735anti-parallel
Strand 4
A
723 727anti-parallel
Strand 5
A
710 715anti-parallel
Strand 6
A
701 706anti-parallel
Strand 7
A
801 803parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il