Analysis of interatomic Contacts of Structural Units in PDB entry:
4N8G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N8G entry

There are 2 chains in PDB entry 4N8G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 28GLN 352
B
 ALA 28ASN 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 67 helices in PDB entry 4N8G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
44 61Right-handed alpha
Helix 2
2
A
77 88Right-handed alpha
Helix 3
3
A
95 100Right-handed alpha
Helix 4
4
A
103 111Right-handed 310
Helix 5
5
A
117 128Right-handed alpha
Helix 6
6
A
128 143Right-handed alpha
Helix 7
7
A
167 172Right-handed 310
Helix 8
8
A
180 190Right-handed alpha
Helix 9
9
A
198 200Right-handed 310
Helix 10
10
A
201 208Right-handed alpha
Helix 11
11
A
217 224Right-handed alpha
Helix 12
12
A
225 229Right-handed 310
Helix 13
13
A
248 255Right-handed alpha
Helix 14
14
A
256 292Right-handed alpha
Helix 15
15
A
300 321Right-handed alpha
Helix 16
16
A
326 338Right-handed alpha
Helix 17
17
A
341 350Right-handed alpha
Helix 18
18
B
44 61Right-handed alpha
Helix 19
19
B
77 88Right-handed alpha
Helix 20
20
B
95 100Right-handed alpha
Helix 21
21
B
103 111Right-handed 310
Helix 22
22
B
117 128Right-handed alpha
Helix 23
23
B
128 143Right-handed alpha
Helix 24
24
B
167 172Right-handed 310
Helix 25
25
B
180 190Right-handed alpha
Helix 26
26
B
198 200Right-handed 310
Helix 27
27
B
201 208Right-handed alpha
Helix 28
28
B
217 224Right-handed alpha
Helix 29
29
B
225 229Right-handed 310
Helix 30
30
B
248 254Right-handed alpha
Helix 31
31
B
256 292Right-handed alpha
Helix 32
32
B
300 321Right-handed alpha
Helix 33
33
B
326 337Right-handed alpha
Helix 34
34
B
341 348Right-handed alpha
Helix 35
35
C
44 61Right-handed alpha
Helix 36
36
C
77 88Right-handed alpha
Helix 37
37
C
95 100Right-handed alpha
Helix 38
38
C
103 111Right-handed 310
Helix 39
39
C
117 128Right-handed alpha
Helix 40
40
C
128 143Right-handed alpha
Helix 41
41
C
167 172Right-handed 310
Helix 42
42
C
180 190Right-handed alpha
Helix 43
43
C
198 200Right-handed 310
Helix 44
44
C
201 208Right-handed alpha
Helix 45
45
C
217 224Right-handed alpha
Helix 46
46
C
225 229Right-handed 310
Helix 47
47
C
248 253Right-handed alpha
Helix 48
48
C
256 292Right-handed alpha
Helix 49
49
C
300 322Right-handed alpha
Helix 50
50
C
326 338Right-handed alpha
Helix 51
51
C
339 343Right-handed 310
Helix 52
52
D
44 61Right-handed alpha
Helix 53
53
D
77 88Right-handed alpha
Helix 54
54
D
95 100Right-handed alpha
Helix 55
55
D
103 111Right-handed 310
Helix 56
56
D
117 128Right-handed alpha
Helix 57
57
D
128 143Right-handed alpha
Helix 58
58
D
167 172Right-handed 310
Helix 59
59
D
180 191Right-handed alpha
Helix 60
60
D
198 200Right-handed 310
Helix 61
61
D
201 208Right-handed alpha
Helix 62
62
D
217 224Right-handed alpha
Helix 63
63
D
225 229Right-handed 310
Helix 64
64
D
248 253Right-handed alpha
Helix 65
65
D
256 292Right-handed alpha
Helix 66
66
D
300 321Right-handed alpha
Helix 67
67
D
326 338Right-handed alpha
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There are 12 sheets in PDB entry 4N8G. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
65 70first strand
Strand 2
A
29 34parallel
Strand 3
A
90 94parallel
Strand 4
A
242 247anti-parallel
Strand 5
A
145 151anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
213 216first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
232 234anti-parallel
Strand 4
A
295 297parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 178first strand
Strand 2
A
193 196parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
65 70first strand
Strand 2
B
29 34parallel
Strand 3
B
91 94parallel
Strand 4
B
243 247anti-parallel
Strand 5
B
145 150anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
213 216first strand
Strand 2
B
157 160anti-parallel
Strand 3
B
232 234anti-parallel
Strand 4
B
295 297parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
175 178first strand
Strand 2
B
193 196parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
65 70first strand
Strand 2
C
29 34parallel
Strand 3
C
91 94parallel
Strand 4
C
242 247anti-parallel
Strand 5
C
145 151anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
213 216first strand
Strand 2
C
157 160anti-parallel
Strand 3
C
232 234anti-parallel
Strand 4
C
295 297parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
175 178first strand
Strand 2
C
193 196parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
65 70first strand
Strand 2
D
29 34parallel
Strand 3
D
91 94parallel
Strand 4
D
242 247anti-parallel
Strand 5
D
145 151anti-parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
213 216first strand
Strand 2
D
157 160anti-parallel
Strand 3
D
232 234anti-parallel
Strand 4
D
295 297parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
175 178first strand
Strand 2
D
193 196parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il