Analysis of interatomic Contacts of Structural Units in PDB entry:
4N9N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4N9N entry

There are 2 chains in PDB entry 4N9N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 604GLN 878
B
 ASN 604GLN 878
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 51 helices in PDB entry 4N9N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
606 619Right-handed alpha
Helix 2
2
A
620 627Right-handed alpha
Helix 3
3
A
631 637Right-handed alpha
Helix 4
4
A
637 646Right-handed alpha
Helix 5
5
A
646 662Right-handed alpha
Helix 6
6
A
669 687Right-handed alpha
Helix 7
7
A
688 693Right-handed 310
Helix 8
8
A
694 712Right-handed alpha
Helix 9
9
A
716 1012Right-handed alpha
Helix 10
10
A
1038 1050Right-handed alpha
Helix 11
11
A
1059 1080Right-handed alpha
Helix 12
12
A
1084 1091Right-handed alpha
Helix 13
13
A
1092 1106Right-handed alpha
Helix 14
14
A
1107 1112Right-handed alpha
Helix 15
15
A
1114 1123Right-handed alpha
Helix 16
16
A
1125 1134Right-handed alpha
Helix 17
17
A
1136 1142Right-handed alpha
Helix 18
18
A
1142 1156Right-handed alpha
Helix 19
19
A
1158 725Right-handed alpha
Helix 20
20
A
731 745Right-handed alpha
Helix 21
21
A
755 760Right-handed alpha
Helix 22
22
A
787 791Right-handed 310
Helix 23
23
A
799 812Right-handed alpha
Helix 24
24
A
816 825Right-handed alpha
Helix 25
25
A
826 828Right-handed 310
Helix 26
26
A
830 840Right-handed alpha
Helix 27
27
A
841 862Right-handed alpha
Helix 28
28
B
606 617Right-handed alpha
Helix 29
29
B
620 628Right-handed alpha
Helix 30
30
B
631 636Right-handed alpha
Helix 31
31
B
637 645Right-handed alpha
Helix 32
32
B
646 663Right-handed alpha
Helix 33
33
B
669 687Right-handed alpha
Helix 34
34
B
688 690Right-handed 310
Helix 35
35
B
695 712Right-handed alpha
Helix 36
36
B
712 1011Right-handed alpha
Helix 37
37
B
1059 1081Right-handed alpha
Helix 38
38
B
1084 1091Right-handed alpha
Helix 39
39
B
1092 1107Right-handed alpha
Helix 40
40
B
1107 1113Right-handed alpha
Helix 41
41
B
1115 1123Right-handed alpha
Helix 42
42
B
1125 1135Right-handed alpha
Helix 43
43
B
1136 1142Right-handed alpha
Helix 44
44
B
1142 1156Right-handed alpha
Helix 45
45
B
731 741Right-handed alpha
Helix 46
46
B
741 746Right-handed alpha
Helix 47
47
B
787 791Right-handed 310
Helix 48
48
B
799 812Right-handed alpha
Helix 49
49
B
814 829Right-handed alpha
Helix 50
50
B
830 838Right-handed alpha
Helix 51
51
B
841 862Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4N9N.

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1014 1019first strand
Strand 2
A
1025 1028anti-parallel
Strand 3
A
1031 1034anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il