Analysis of interatomic Contacts of Structural Units in PDB entry:
4NF0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4NF0 entry

There are 5 chains in PDB entry 4NF0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	PRO 28	ILE 318
B	PRO 28	ILE 318
C	PRO 28	ILE 318
D	PRO 28	ALA 316
E	ILE 31	MET 184

There are132 helices in PDB entry 4NF0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	41	58	Right-handed alpha
Helix 2	2	A	77	84	Right-handed alpha
Helix 3	3	A	95	97	Right-handed 310
Helix 4	4	A	104	109	Right-handed 310
Helix 5	5	A	115	124	Right-handed alpha
Helix 6	6	A	125	131	Right-handed alpha
Helix 7	7	A	132	134	Right-handed 310
Helix 8	8	A	135	138	Right-handed 310
Helix 9	9	A	161	166	Right-handed 310
Helix 10	10	A	175	185	Right-handed alpha
Helix 11	11	A	196	203	Right-handed alpha
Helix 12	12	A	212	219	Right-handed alpha
Helix 13	13	A	220	225	Right-handed 310
Helix 14	14	A	244	250	Right-handed alpha
Helix 15	15	A	251	288	Right-handed alpha
Helix 16	16	A	296	308	Right-handed alpha
Helix 17	17	A	309	314	Right-handed 310
Helix 18	18	B	41	50	Right-handed alpha
Helix 19	19	B	77	84	Right-handed alpha
Helix 20	20	B	95	97	Right-handed 310
Helix 21	21	B	104	109	Right-handed 310
Helix 22	22	B	115	124	Right-handed alpha
Helix 23	23	B	125	131	Right-handed alpha
Helix 24	24	B	132	134	Right-handed 310
Helix 25	25	B	135	138	Right-handed 310
Helix 26	26	B	161	166	Right-handed 310
Helix 27	27	B	175	185	Right-handed alpha
Helix 28	28	B	193	195	Right-handed 310
Helix 29	29	B	196	203	Right-handed alpha
Helix 30	30	B	212	219	Right-handed alpha
Helix 31	31	B	244	249	Right-handed alpha
Helix 32	32	B	256	288	Right-handed alpha
Helix 33	33	B	296	308	Right-handed alpha
Helix 34	34	B	310	315	Right-handed alpha
Helix 35	35	C	41	58	Right-handed alpha
Helix 36	36	C	77	84	Right-handed alpha
Helix 37	37	C	95	97	Right-handed 310
Helix 38	38	C	104	109	Right-handed 310
Helix 39	39	C	115	124	Right-handed alpha
Helix 40	40	C	125	131	Right-handed alpha
Helix 41	41	C	132	134	Right-handed 310
Helix 42	42	C	135	138	Right-handed 310
Helix 43	43	C	161	166	Right-handed 310
Helix 44	44	C	175	185	Right-handed alpha
Helix 45	45	C	196	203	Right-handed alpha
Helix 46	46	C	212	219	Right-handed alpha
Helix 47	47	C	221	225	Right-handed 310
Helix 48	48	C	244	250	Right-handed alpha
Helix 49	49	C	251	288	Right-handed alpha
Helix 50	50	C	296	308	Right-handed alpha
Helix 51	51	C	309	314	Right-handed 310
Helix 52	52	D	41	58	Right-handed alpha
Helix 53	53	D	77	84	Right-handed alpha
Helix 54	54	D	95	97	Right-handed 310
Helix 55	55	D	104	109	Right-handed 310
Helix 56	56	D	115	124	Right-handed alpha
Helix 57	57	D	125	131	Right-handed alpha
Helix 58	58	D	132	134	Right-handed 310
Helix 59	59	D	135	138	Right-handed 310
Helix 60	60	D	161	166	Right-handed 310
Helix 61	61	D	175	185	Right-handed alpha
Helix 62	62	D	196	203	Right-handed alpha
Helix 63	63	D	212	220	Right-handed alpha
Helix 64	64	D	221	224	Right-handed 310
Helix 65	65	D	244	250	Right-handed alpha
Helix 66	66	D	251	287	Right-handed alpha
Helix 67	67	D	296	308	Right-handed alpha
Helix 68	68	D	309	315	Right-handed 310
Helix 69	69	E	41	50	Right-handed alpha
Helix 70	70	E	74	84	Right-handed alpha
Helix 71	71	E	104	109	Right-handed 310
Helix 72	72	E	115	123	Right-handed alpha
Helix 73	73	E	134	139	Right-handed 310
Helix 74	74	E	161	165	Right-handed 310
Helix 75	75	E	175	184	Right-handed alpha
Helix 76	76	E	193	195	Right-handed 310
Helix 77	77	E	196	203	Right-handed alpha
Helix 78	78	E	212	219	Right-handed alpha
Helix 79	79	E	221	225	Right-handed 310
Helix 80	80	E	259	287	Right-handed alpha
Helix 81	81	E	296	306	Right-handed alpha
Helix 82	82	F	41	58	Right-handed alpha
Helix 83	83	F	77	84	Right-handed alpha
Helix 84	84	F	95	97	Right-handed 310
Helix 85	85	F	104	109	Right-handed 310
Helix 86	86	F	115	124	Right-handed alpha
Helix 87	87	F	125	131	Right-handed alpha
Helix 88	88	F	132	134	Right-handed 310
Helix 89	89	F	135	138	Right-handed 310
Helix 90	90	F	161	166	Right-handed 310
Helix 91	91	F	175	184	Right-handed alpha
Helix 92	92	F	193	195	Right-handed 310
Helix 93	93	F	196	203	Right-handed alpha
Helix 94	94	F	212	219	Right-handed alpha
Helix 95	95	F	220	225	Right-handed 310
Helix 96	96	F	244	248	Right-handed alpha
Helix 97	97	F	251	287	Right-handed alpha
Helix 98	98	F	296	308	Right-handed alpha
Helix 99	99	F	309	315	Right-handed 310
Helix 100	100	G	41	58	Right-handed alpha
Helix 101	101	G	77	84	Right-handed alpha
Helix 102	102	G	95	97	Right-handed 310
Helix 103	103	G	104	109	Right-handed 310
Helix 104	104	G	115	124	Right-handed alpha
Helix 105	105	G	125	131	Right-handed alpha
Helix 106	106	G	132	134	Right-handed 310
Helix 107	107	G	135	138	Right-handed 310
Helix 108	108	G	161	166	Right-handed 310
Helix 109	109	G	175	185	Right-handed alpha
Helix 110	110	G	196	203	Right-handed alpha
Helix 111	111	G	212	219	Right-handed alpha
Helix 112	112	G	220	225	Right-handed 310
Helix 113	113	G	244	250	Right-handed alpha
Helix 114	114	G	251	287	Right-handed alpha
Helix 115	115	G	296	308	Right-handed alpha
Helix 116	116	G	309	314	Right-handed 310
Helix 117	117	H	41	53	Right-handed alpha
Helix 118	118	H	95	97	Right-handed 310
Helix 119	119	H	104	109	Right-handed 310
Helix 120	120	H	115	124	Right-handed alpha
Helix 121	121	H	125	131	Right-handed alpha
Helix 122	122	H	132	134	Right-handed 310
Helix 123	123	H	161	166	Right-handed 310
Helix 124	124	H	175	184	Right-handed alpha
Helix 125	125	H	193	195	Right-handed 310
Helix 126	126	H	196	203	Right-handed alpha
Helix 127	127	H	212	219	Right-handed alpha
Helix 128	128	H	220	225	Right-handed 310
Helix 129	129	H	244	250	Right-handed alpha
Helix 130	130	H	257	287	Right-handed alpha
Helix 131	131	H	296	308	Right-handed alpha
Helix 132	132	H	310	315	Right-handed alpha

There are 18 sheets in PDB entry 4NF0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	62	67	first strand
Strand 2	A	29	34	parallel
Strand 3	A	89	93	parallel
Strand 4	A	235	243	anti-parallel
Strand 5	A	140	150	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	191	first strand
Strand 2	A	169	172	parallel
Strand 3	A	208	211	parallel
Strand 4	A	152	155	anti-parallel
Strand 5	A	227	229	anti-parallel
Strand 6	A	291	293	parallel

Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	32	34	parallel
Strand 3	B	89	93	parallel
Strand 4	B	227	243	anti-parallel
Strand 5	B	140	155	anti-parallel
Strand 6	B	208	211	anti-parallel
Strand 7	B	169	172	parallel
Strand 8	B	188	191	parallel

Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	32	34	parallel
Strand 3	B	89	93	parallel
Strand 4	B	227	243	anti-parallel
Strand 5	B	291	293	parallel

Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	67	first strand
Strand 2	C	29	34	parallel
Strand 3	C	89	93	parallel
Strand 4	C	227	243	anti-parallel
Strand 5	C	140	155	anti-parallel
Strand 6	C	208	211	anti-parallel
Strand 7	C	169	172	parallel
Strand 8	C	188	191	parallel

Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	62	67	first strand
Strand 2	C	29	34	parallel
Strand 3	C	89	93	parallel
Strand 4	C	227	243	anti-parallel
Strand 5	C	291	293	parallel

Back to list of sheets
Back to top of page

There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	67	first strand
Strand 2	D	29	34	parallel
Strand 3	D	89	93	parallel
Strand 4	D	227	243	anti-parallel
Strand 5	D	140	155	anti-parallel
Strand 6	D	208	211	anti-parallel
Strand 7	D	169	172	parallel
Strand 8	D	188	191	parallel

Back to list of sheets
Back to top of page

There are 5 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	62	67	first strand
Strand 2	D	29	34	parallel
Strand 3	D	89	93	parallel
Strand 4	D	227	243	anti-parallel
Strand 5	D	291	293	parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	34	first strand
Strand 2	E	65	67	parallel

Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	90	93	first strand
Strand 2	E	235	242	anti-parallel
Strand 3	E	141	150	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	188	191	first strand
Strand 2	E	169	172	parallel
Strand 3	E	208	211	parallel
Strand 4	E	152	155	anti-parallel
Strand 5	E	227	229	anti-parallel
Strand 6	E	291	293	parallel

Back to list of sheets
Back to top of page

There are 8 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	67	first strand
Strand 2	F	29	34	parallel
Strand 3	F	89	93	parallel
Strand 4	F	227	243	anti-parallel
Strand 5	F	140	155	anti-parallel
Strand 6	F	208	211	anti-parallel
Strand 7	F	169	172	parallel
Strand 8	F	188	191	parallel

Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	62	67	first strand
Strand 2	F	29	34	parallel
Strand 3	F	89	93	parallel
Strand 4	F	227	243	anti-parallel
Strand 5	F	291	293	parallel

Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	29	34	first strand
Strand 2	G	62	67	parallel

Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	93	first strand
Strand 2	G	235	243	anti-parallel
Strand 3	G	140	150	anti-parallel

Back to list of sheets
Back to top of page

There are 6 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	188	191	first strand
Strand 2	G	169	172	parallel
Strand 3	G	208	211	parallel
Strand 4	G	152	155	anti-parallel
Strand 5	G	227	229	anti-parallel
Strand 6	G	291	293	parallel

Back to list of sheets
Back to top of page

There are 6 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	93	first strand
Strand 2	H	227	243	anti-parallel
Strand 3	H	140	155	anti-parallel
Strand 4	H	208	211	anti-parallel
Strand 5	H	169	172	parallel
Strand 6	H	188	191	parallel

Back to list of sheets
Back to top of page

There are 3 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	90	93	first strand
Strand 2	H	227	243	anti-parallel
Strand 3	H	291	293	parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4NF0

Analysis of interatomic Contacts of Structural Units in PDB entry:
4NF0