Analysis of interatomic Contacts of Structural Units in PDB entry:
4NHE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NHE entry

There are 3 chains in PDB entry 4NHE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 325
B
 ALA 0LYS 325
C
 ALA 0LYS 325
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4NHE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
10 23Right-handed alpha
Helix 2
2
A
35 44Right-handed alpha
Helix 3
3
A
54 61Right-handed alpha
Helix 4
4
A
71 73Right-handed 310
Helix 5
5
A
74 85Right-handed alpha
Helix 6
6
A
98 112Right-handed alpha
Helix 7
7
A
125 137Right-handed alpha
Helix 8
8
A
153 159Right-handed alpha
Helix 9
9
A
163 167Right-handed 310
Helix 10
10
A
173 178Right-handed alpha
Helix 11
11
A
179 191Right-handed alpha
Helix 12
12
A
277 290Right-handed alpha
Helix 13
13
A
292 318Right-handed alpha
Helix 14
14
A
321 325Right-handed 310
Helix 15
15
B
10 23Right-handed alpha
Helix 16
16
B
35 44Right-handed alpha
Helix 17
17
B
54 61Right-handed alpha
Helix 18
18
B
71 73Right-handed 310
Helix 19
19
B
74 85Right-handed alpha
Helix 20
20
B
98 112Right-handed alpha
Helix 21
21
B
125 136Right-handed alpha
Helix 22
22
B
153 159Right-handed alpha
Helix 23
23
B
163 167Right-handed 310
Helix 24
24
B
173 178Right-handed alpha
Helix 25
25
B
179 191Right-handed alpha
Helix 26
26
B
277 290Right-handed alpha
Helix 27
27
B
292 318Right-handed alpha
Helix 28
28
B
321 325Right-handed 310
Helix 29
29
C
10 23Right-handed alpha
Helix 30
30
C
35 44Right-handed alpha
Helix 31
31
C
54 59Right-handed alpha
Helix 32
32
C
71 73Right-handed 310
Helix 33
33
C
74 85Right-handed alpha
Helix 34
34
C
98 112Right-handed alpha
Helix 35
35
C
125 136Right-handed alpha
Helix 36
36
C
153 159Right-handed alpha
Helix 37
37
C
163 167Right-handed 310
Helix 38
38
C
173 178Right-handed alpha
Helix 39
39
C
179 191Right-handed alpha
Helix 40
40
C
277 290Right-handed alpha
Helix 41
41
C
292 318Right-handed alpha
Helix 42
42
C
321 325Right-handed 310
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There are 6 sheets in PDB entry 4NHE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
A
26 32parallel
Strand 3
A
2 7parallel
Strand 4
A
65 68parallel
Strand 5
A
88 92parallel
Strand 6
A
116 119parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
195 202first strand
Strand 2
A
208 217anti-parallel
Strand 3
A
220 227anti-parallel
Strand 4
A
140 148parallel
Strand 5
A
236 240anti-parallel
Strand 6
A
243 247anti-parallel
Strand 7
A
256 260anti-parallel
Strand 8
A
265 268anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
50 52first strand
Strand 2
B
26 32parallel
Strand 3
B
2 7parallel
Strand 4
B
65 68parallel
Strand 5
B
88 92parallel
Strand 6
B
116 119parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
195 202first strand
Strand 2
B
208 216anti-parallel
Strand 3
B
221 227anti-parallel
Strand 4
B
140 148parallel
Strand 5
B
236 240anti-parallel
Strand 6
B
243 247anti-parallel
Strand 7
B
256 260anti-parallel
Strand 8
B
265 267anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
50 52first strand
Strand 2
C
26 32parallel
Strand 3
C
2 7parallel
Strand 4
C
65 68parallel
Strand 5
C
88 92parallel
Strand 6
C
116 119parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
195 202first strand
Strand 2
C
208 216anti-parallel
Strand 3
C
221 227anti-parallel
Strand 4
C
140 148parallel
Strand 5
C
236 240anti-parallel
Strand 6
C
243 247anti-parallel
Strand 7
C
256 260anti-parallel
Strand 8
C
265 267anti-parallel
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