Analysis of interatomic Contacts of Structural Units in PDB entry:
4NK8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NK8 entry

There are 8 chains in PDB entry 4NK8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 69LEU 109
A
 GLU 111GLU 190
A
 GLY 192ALA 242
A
 THR 244SER 254
A
 SER 256VAL 303
A
 GLY 305LYS 337
A
 HIS 339ASN 355
A
 SER 357MET 492
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 4NK8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 88Right-handed alpha
Helix 2
2
A
106 114Right-handed alpha
Helix 3
3
A
115 118Right-handed 310
Helix 4
4
A
119 127Right-handed alpha
Helix 5
5
A
142 149Right-handed alpha
Helix 6
6
A
265 273Right-handed alpha
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There are no sheets in PDB entry 4NK8
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il