Analysis of interatomic Contacts of Structural Units in PDB entry:
4NMC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NMC entry

There are 2 chains in PDB entry 4NMC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 4TRP 1002
B
 ASN 3LEU 385
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 4NMC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 20Right-handed alpha
Helix 2
2
A
48 59Right-handed alpha
Helix 3
3
A
60 62Right-handed 310
Helix 4
4
A
64 76Right-handed alpha
Helix 5
5
A
83 97Right-handed alpha
Helix 6
6
A
100 117Right-handed alpha
Helix 7
7
A
124 137Right-handed alpha
Helix 8
8
A
153 176Right-handed alpha
Helix 9
9
A
190 194Right-handed 310
Helix 10
10
A
203 208Right-handed 310
Helix 11
11
A
212 214Right-handed 310
Helix 12
12
A
215 237Right-handed alpha
Helix 13
13
A
247 249Right-handed 310
Helix 14
14
A
250 265Right-handed alpha
Helix 15
15
A
281 297Right-handed alpha
Helix 16
16
A
309 321Right-handed alpha
Helix 17
17
A
329 347Right-handed alpha
Helix 18
18
A
359 372Right-handed alpha
Helix 19
19
A
376 378Right-handed 310
Helix 20
20
A
389 401Right-handed alpha
Helix 21
21
A
411 419Right-handed alpha
Helix 22
22
A
449 461Right-handed alpha
Helix 23
23
A
488 504Right-handed alpha
Helix 24
24
A
544 564Right-handed alpha
Helix 25
25
A
566 584Right-handed alpha
Helix 26
26
A
584 597Right-handed alpha
Helix 27
27
A
599 625Right-handed alpha
Helix 28
28
A
658 671Right-handed alpha
Helix 29
29
A
683 697Right-handed alpha
Helix 30
30
A
710 721Right-handed alpha
Helix 31
31
A
732 744Right-handed alpha
Helix 32
32
A
773 787Right-handed alpha
Helix 33
33
A
788 791Right-handed 310
Helix 34
34
A
803 820Right-handed alpha
Helix 35
35
A
837 855Right-handed alpha
Helix 36
36
A
883 887Right-handed 310
Helix 37
37
A
902 911Right-handed alpha
Helix 38
38
A
925 936Right-handed alpha
Helix 39
39
A
960 964Right-handed 310
Helix 40
40
A
974 977Right-handed 310
Helix 41
41
B
4 21Right-handed alpha
Helix 42
42
B
26 30Right-handed 310
Helix 43
43
B
33 45Right-handed alpha
Helix 44
44
B
45 59Right-handed alpha
Helix 45
45
B
60 62Right-handed 310
Helix 46
46
B
64 77Right-handed alpha
Helix 47
47
B
101 118Right-handed alpha
Helix 48
48
B
124 138Right-handed alpha
Helix 49
49
B
153 173Right-handed alpha
Helix 50
50
B
174 178Right-handed 310
Helix 51
51
B
190 194Right-handed 310
Helix 52
52
B
203 207Right-handed 310
Helix 53
53
B
212 214Right-handed 310
Helix 54
54
B
215 237Right-handed alpha
Helix 55
55
B
247 249Right-handed 310
Helix 56
56
B
250 265Right-handed alpha
Helix 57
57
B
281 296Right-handed alpha
Helix 58
58
B
309 321Right-handed alpha
Helix 59
59
B
329 347Right-handed alpha
Helix 60
60
B
359 373Right-handed alpha
Helix 61
61
B
376 378Right-handed 310
Helix 62
62
B
389 400Right-handed alpha
Helix 63
63
B
415 428Right-handed alpha
Helix 64
64
B
431 438Right-handed alpha
Helix 65
65
B
442 447Right-handed alpha
Helix 66
66
B
449 462Right-handed alpha
Helix 67
67
B
488 504Right-handed alpha
Helix 68
68
B
544 564Right-handed alpha
Helix 69
69
B
566 584Right-handed alpha
Helix 70
70
B
584 597Right-handed alpha
Helix 71
71
B
599 625Right-handed alpha
Helix 72
72
B
658 671Right-handed alpha
Helix 73
73
B
683 698Right-handed alpha
Helix 74
74
B
710 721Right-handed alpha
Helix 75
75
B
732 745Right-handed alpha
Helix 76
76
B
773 787Right-handed alpha
Helix 77
77
B
788 791Right-handed 310
Helix 78
78
B
805 820Right-handed alpha
Helix 79
79
B
837 855Right-handed alpha
Helix 80
80
B
883 887Right-handed 310
Helix 81
81
B
902 911Right-handed alpha
Helix 82
82
B
925 936Right-handed alpha
Helix 83
83
B
960 964Right-handed 310
Helix 84
84
B
974 977Right-handed 310
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There are 10 sheets in PDB entry 4NMC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
141 146first strand
Strand 2
A
199 202parallel
Strand 3
A
240 243parallel
Strand 4
A
271 276parallel
Strand 5
A
300 305parallel
Strand 6
A
351 356parallel
Strand 7
A
380 385parallel
Strand 8
A
403 409parallel
Strand 9
A
141 146parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
508 510first strand
Strand 2
A
532 541parallel
Strand 3
A
524 529anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
512 514first strand
Strand 2
A
517 519anti-parallel
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There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
628 630first strand
Strand 2
A
636 644anti-parallel
Strand 3
A
979 987anti-parallel
Strand 4
B
940 943parallel
Strand 5
B
918 922parallel
Strand 6
B
764 768parallel
Strand 7
B
796 802parallel
Strand 8
B
894 900parallel
Strand 9
B
874 877parallel
Strand 10
B
856 860anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
704 706first strand
Strand 2
A
674 678parallel
Strand 3
A
647 651parallel
Strand 4
A
724 730parallel
Strand 5
A
755 759parallel
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There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
856 860first strand
Strand 2
A
874 877anti-parallel
Strand 3
A
894 900parallel
Strand 4
A
796 802parallel
Strand 5
A
764 768parallel
Strand 6
A
918 922parallel
Strand 7
A
940 943parallel
Strand 8
B
979 987parallel
Strand 9
B
636 644anti-parallel
Strand 10
B
628 629anti-parallel
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There are 9 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
141 146first strand
Strand 2
B
199 202parallel
Strand 3
B
240 243parallel
Strand 4
B
271 276parallel
Strand 5
B
300 305parallel
Strand 6
B
351 356parallel
Strand 7
B
380 385parallel
Strand 8
B
403 409parallel
Strand 9
B
141 146parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
508 510first strand
Strand 2
B
532 541parallel
Strand 3
B
524 529anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
512 514first strand
Strand 2
B
517 519anti-parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
704 706first strand
Strand 2
B
674 678parallel
Strand 3
B
647 651parallel
Strand 4
B
724 730parallel
Strand 5
B
755 759parallel
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