Analysis of interatomic Contacts of Structural Units in PDB entry:
4NOO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NOO entry

There are 4 chains in PDB entry 4NOO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 816ASP 1015
B
 CYS 28SER 122
C
 ILE 816ASP 1015
D
 CYS 28SER 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 4NOO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
820 822Right-handed 310
Helix 2
2
A
823 828Right-handed alpha
Helix 3
3
A
858 867Right-handed alpha
Helix 4
4
A
869 874Right-handed 310
Helix 5
5
A
880 894Right-handed alpha
Helix 6
6
A
894 910Right-handed alpha
Helix 7
7
A
910 920Right-handed alpha
Helix 8
8
A
929 944Right-handed alpha
Helix 9
9
A
948 954Right-handed alpha
Helix 10
10
A
963 978Right-handed alpha
Helix 11
11
A
978 983Right-handed alpha
Helix 12
12
A
986 988Right-handed 310
Helix 13
13
A
989 1010Right-handed alpha
Helix 14
14
B
34 59Right-handed alpha
Helix 15
15
B
61 65Right-handed 310
Helix 16
16
B
69 83Right-handed alpha
Helix 17
17
B
84 88Right-handed 310
Helix 18
18
B
89 121Right-handed alpha
Helix 19
19
C
820 822Right-handed 310
Helix 20
20
C
823 828Right-handed alpha
Helix 21
21
C
858 867Right-handed alpha
Helix 22
22
C
869 874Right-handed 310
Helix 23
23
C
880 894Right-handed alpha
Helix 24
24
C
894 910Right-handed alpha
Helix 25
25
C
910 922Right-handed alpha
Helix 26
26
C
929 944Right-handed alpha
Helix 27
27
C
948 954Right-handed alpha
Helix 28
28
C
963 978Right-handed alpha
Helix 29
29
C
978 983Right-handed alpha
Helix 30
30
C
986 988Right-handed 310
Helix 31
31
C
989 1010Right-handed alpha
Helix 32
32
D
34 59Right-handed alpha
Helix 33
33
D
69 83Right-handed alpha
Helix 34
34
D
84 88Right-handed 310
Helix 35
35
D
89 121Right-handed alpha
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There are 2 sheets in PDB entry 4NOO. Click on sheet of interest to get list of strands forming it: A, B,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
836 838first strand
Strand 2
A
846 848anti-parallel
Strand 3
A
853 854anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
836 838first strand
Strand 2
C
846 848anti-parallel
Strand 3
C
853 854anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il