Analysis of interatomic Contacts of Structural Units in PDB entry:
4NQJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NQJ entry

There are 3 chains in PDB entry 4NQJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 143CYS 319
B
 GLN 146GLY 321
C
 VAL 144PRO 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 4NQJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
143 149Right-handed 310
Helix 2
2
A
152 261Right-handed alpha
Helix 3
3
A
265 272Right-handed alpha
Helix 4
4
A
272 288Right-handed alpha
Helix 5
5
A
297 302Right-handed 310
Helix 6
6
A
304 319Right-handed alpha
Helix 7
7
B
152 262Right-handed alpha
Helix 8
8
B
265 272Right-handed alpha
Helix 9
9
B
272 288Right-handed alpha
Helix 10
10
B
297 302Right-handed 310
Helix 11
11
B
304 319Right-handed alpha
Helix 12
12
C
146 150Right-handed 310
Helix 13
13
C
152 262Right-handed alpha
Helix 14
14
C
265 272Right-handed alpha
Helix 15
15
C
272 288Right-handed alpha
Helix 16
16
C
298 302Right-handed 310
Helix 17
17
C
304 319Right-handed alpha
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There are no sheets in PDB entry 4NQJ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il