Analysis of interatomic Contacts of Structural Units in PDB entry:
4NUX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NUX entry

There is 1 chain in PDB entry 4NUX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 376TYR 591
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 12 helices in PDB entry 4NUX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
388 407Right-handed alpha
Helix 2
2
A
412 415Right-handed 310
Helix 3
3
A
416 423Right-handed alpha
Helix 4
4
A
424 439Right-handed alpha
Helix 5
5
A
448 459Right-handed alpha
Helix 6
6
A
478 487Right-handed alpha
Helix 7
7
A
488 497Right-handed 310
Helix 8
8
A
509 513Right-handed 310
Helix 9
9
A
528 538Right-handed alpha
Helix 10
10
A
556 561Right-handed 310
Helix 11
11
A
563 581Right-handed alpha
Helix 12
12
A
583 589Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 4NUX.

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
409 411first strand
Strand 2
A
379 383parallel
Strand 3
A
442 446parallel
Strand 4
A
499 504parallel
Strand 5
A
522 525parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il