Analysis of interatomic Contacts of Structural Units in PDB entry:
4NUZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NUZ entry

There is 1 chain in PDB entry 4NUZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 98LYS 989
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 41 helices in PDB entry 4NUZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
121 123Right-handed 310
Helix 2
2
A
136 140Right-handed 310
Helix 3
3
A
157 167Right-handed alpha
Helix 4
4
A
167 175Right-handed alpha
Helix 5
5
A
186 189Right-handed 310
Helix 6
6
A
194 199Right-handed 310
Helix 7
7
A
206 222Right-handed alpha
Helix 8
8
A
235 239Right-handed 310
Helix 9
9
A
247 263Right-handed alpha
Helix 10
10
A
283 287Right-handed 310
Helix 11
11
A
289 294Right-handed alpha
Helix 12
12
A
295 297Right-handed 310
Helix 13
13
A
305 312Right-handed alpha
Helix 14
14
A
324 333Right-handed alpha
Helix 15
15
A
337 339Right-handed 310
Helix 16
16
A
353 357Right-handed 310
Helix 17
17
A
380 388Right-handed alpha
Helix 18
18
A
404 407Right-handed 310
Helix 19
19
A
413 417Right-handed 310
Helix 20
20
A
424 428Right-handed 310
Helix 21
21
A
434 447Right-handed alpha
Helix 22
22
A
448 451Right-handed 310
Helix 23
23
A
460 471Right-handed alpha
Helix 24
24
A
474 479Right-handed alpha
Helix 25
25
A
497 501Right-handed 310
Helix 26
26
A
519 523Right-handed 310
Helix 27
27
A
524 528Right-handed 310
Helix 28
28
A
542 546Right-handed 310
Helix 29
29
A
582 586Right-handed 310
Helix 30
30
A
605 622Right-handed alpha
Helix 31
31
A
660 665Right-handed alpha
Helix 32
32
A
678 687Right-handed alpha
Helix 33
33
A
701 706Right-handed alpha
Helix 34
34
A
780 785Right-handed alpha
Helix 35
35
A
786 789Right-handed 310
Helix 36
36
A
827 830Right-handed 310
Helix 37
37
A
853 860Right-handed alpha
Helix 38
38
A
866 868Right-handed 310
Helix 39
39
A
926 941Right-handed alpha
Helix 40
40
A
948 967Right-handed alpha
Helix 41
41
A
972 987Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 4NUZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 119first strand
Strand 2
A
146 150parallel
Strand 3
A
178 184parallel
Strand 4
A
229 234parallel
Strand 5
A
275 280parallel
Strand 6
A
299 303parallel
Strand 7
A
341 346parallel
Strand 8
A
398 402parallel
Strand 9
A
113 119parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
241 242first strand
Strand 2
A
245 246anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
313 315first strand
Strand 2
A
320 322anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
484 487first strand
Strand 2
A
506 510parallel
Strand 3
A
556 560parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
517 518first strand
Strand 2
A
567 569parallel
Strand 3
A
591 593parallel
Strand 4
A
629 630parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 531first strand
Strand 2
A
551 552anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
648 651first strand
Strand 2
A
752 758parallel
Strand 3
A
735 742anti-parallel
Strand 4
A
713 718anti-parallel
Strand 5
A
723 724anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
657 659first strand
Strand 2
A
728 730anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
668 669first strand
Strand 2
A
675 676anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
689 690first strand
Strand 2
A
693 694anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
766 767first strand
Strand 2
A
917 923anti-parallel
Strand 3
A
817 825anti-parallel
Strand 4
A
885 893anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
773 776first strand
Strand 2
A
806 812anti-parallel
Strand 3
A
897 903anti-parallel
Strand 4
A
841 847anti-parallel
Strand 5
A
870 877anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il