Analysis of interatomic Contacts of Structural Units in PDB entry:
4NV0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NV0 entry

There are 2 chains in PDB entry 4NV0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 13LEU 311
B
 ARG 13GLU 312
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 4NV0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 24Right-handed 310
Helix 2
2
A
31 46Right-handed alpha
Helix 3
3
A
73 80Right-handed alpha
Helix 4
4
A
87 104Right-handed alpha
Helix 5
5
A
109 128Right-handed alpha
Helix 6
6
A
134 143Right-handed alpha
Helix 7
7
A
144 149Right-handed 310
Helix 8
8
A
152 164Right-handed alpha
Helix 9
9
A
175 185Right-handed alpha
Helix 10
10
A
230 235Right-handed alpha
Helix 11
11
A
246 250Right-handed 310
Helix 12
12
A
271 283Right-handed alpha
Helix 13
13
A
293 311Right-handed alpha
Helix 14
14
B
15 24Right-handed 310
Helix 15
15
B
31 46Right-handed alpha
Helix 16
16
B
73 80Right-handed alpha
Helix 17
17
B
85 104Right-handed alpha
Helix 18
18
B
109 128Right-handed alpha
Helix 19
19
B
134 136Right-handed 310
Helix 20
20
B
137 143Right-handed alpha
Helix 21
21
B
144 149Right-handed 310
Helix 22
22
B
152 164Right-handed alpha
Helix 23
23
B
175 185Right-handed alpha
Helix 24
24
B
230 235Right-handed alpha
Helix 25
25
B
246 252Right-handed 310
Helix 26
26
B
271 283Right-handed alpha
Helix 27
27
B
293 312Right-handed alpha
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There are 4 sheets in PDB entry 4NV0. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
285 288anti-parallel
Strand 3
A
261 268parallel
Strand 4
A
239 244parallel
Strand 5
A
50 54parallel
Strand 6
A
167 174parallel
Strand 7
A
192 197parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 202first strand
Strand 2
A
205 209anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
285 288anti-parallel
Strand 3
B
261 268parallel
Strand 4
B
239 244parallel
Strand 5
B
50 54parallel
Strand 6
B
167 174parallel
Strand 7
B
192 197parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
199 202first strand
Strand 2
B
205 209anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il