Analysis of interatomic Contacts of Structural Units in PDB entry:
4NV1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NV1 entry

There are 8 chains in PDB entry 4NV1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 MET 1SER 241
D
 MET 1ILE 240
E
 GLY -1ILE 240
F
 MET 1ILE 240
B
 MET 1SER 241
A
 MET 1ILE 240
G
 GLY -1ILE 240
H
 MET 1SER 241
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 78 helices in PDB entry 4NV1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
10 23Right-handed alpha
Helix 2
2
C
34 38Right-handed 310
Helix 3
3
C
41 47Right-handed alpha
Helix 4
4
C
54 59Right-handed alpha
Helix 5
5
C
60 63Right-handed 310
Helix 6
6
C
79 86Right-handed alpha
Helix 7
7
C
103 112Right-handed alpha
Helix 8
8
C
144 169Right-handed alpha
Helix 9
9
C
185 194Right-handed alpha
Helix 10
10
C
203 213Right-handed alpha
Helix 11
11
D
10 22Right-handed alpha
Helix 12
12
D
34 38Right-handed 310
Helix 13
13
D
41 47Right-handed alpha
Helix 14
14
D
54 59Right-handed alpha
Helix 15
15
D
60 63Right-handed 310
Helix 16
16
D
79 86Right-handed alpha
Helix 17
17
D
103 112Right-handed alpha
Helix 18
18
D
144 169Right-handed alpha
Helix 19
19
D
185 194Right-handed alpha
Helix 20
20
D
203 213Right-handed alpha
Helix 21
21
E
10 23Right-handed alpha
Helix 22
22
E
41 47Right-handed alpha
Helix 23
23
E
54 59Right-handed alpha
Helix 24
24
E
60 63Right-handed 310
Helix 25
25
E
79 86Right-handed alpha
Helix 26
26
E
103 112Right-handed alpha
Helix 27
27
E
144 169Right-handed alpha
Helix 28
28
E
185 191Right-handed alpha
Helix 29
29
E
203 213Right-handed alpha
Helix 30
30
F
10 22Right-handed alpha
Helix 31
31
F
35 39Right-handed 310
Helix 32
32
F
41 47Right-handed alpha
Helix 33
33
F
54 59Right-handed alpha
Helix 34
34
F
60 63Right-handed 310
Helix 35
35
F
79 86Right-handed alpha
Helix 36
36
F
103 112Right-handed alpha
Helix 37
37
F
144 169Right-handed alpha
Helix 38
38
F
185 194Right-handed alpha
Helix 39
39
F
203 214Right-handed alpha
Helix 40
40
B
10 23Right-handed alpha
Helix 41
41
B
34 38Right-handed 310
Helix 42
42
B
41 47Right-handed alpha
Helix 43
43
B
54 59Right-handed alpha
Helix 44
44
B
60 63Right-handed 310
Helix 45
45
B
79 86Right-handed alpha
Helix 46
46
B
103 112Right-handed alpha
Helix 47
47
B
144 169Right-handed alpha
Helix 48
48
B
185 194Right-handed alpha
Helix 49
49
B
203 213Right-handed alpha
Helix 50
50
A
10 23Right-handed alpha
Helix 51
51
A
34 38Right-handed 310
Helix 52
52
A
41 47Right-handed alpha
Helix 53
53
A
54 59Right-handed alpha
Helix 54
54
A
60 63Right-handed 310
Helix 55
55
A
79 86Right-handed alpha
Helix 56
56
A
103 112Right-handed alpha
Helix 57
57
A
144 169Right-handed alpha
Helix 58
58
A
185 194Right-handed alpha
Helix 59
59
A
203 213Right-handed alpha
Helix 60
60
G
10 22Right-handed alpha
Helix 61
61
G
34 38Right-handed 310
Helix 62
62
G
41 47Right-handed alpha
Helix 63
63
G
58 63Right-handed 310
Helix 64
64
G
79 86Right-handed alpha
Helix 65
65
G
103 112Right-handed alpha
Helix 66
66
G
144 169Right-handed alpha
Helix 67
67
G
185 191Right-handed alpha
Helix 68
68
G
203 213Right-handed alpha
Helix 69
69
H
10 23Right-handed alpha
Helix 70
70
H
34 38Right-handed 310
Helix 71
71
H
41 47Right-handed alpha
Helix 72
72
H
54 59Right-handed alpha
Helix 73
73
H
60 63Right-handed 310
Helix 74
74
H
79 86Right-handed alpha
Helix 75
75
H
103 112Right-handed alpha
Helix 76
76
H
144 169Right-handed alpha
Helix 77
77
H
185 194Right-handed alpha
Helix 78
78
H
203 214Right-handed alpha
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There are 24 sheets in PDB entry 4NV1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
51 52first strand
Strand 2
C
27 33parallel
Strand 3
C
2 7parallel
Strand 4
C
68 72parallel
Strand 5
C
87 92parallel
Strand 6
C
115 121anti-parallel
Strand 7
C
131 137anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 101first strand
Strand 2
C
183 184parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
200 202first strand
Strand 2
D
200 202anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
221 224first strand
Strand 2
C
230 240anti-parallel
Strand 3
D
230 239anti-parallel
Strand 4
D
221 224anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
51 52first strand
Strand 2
D
27 33parallel
Strand 3
D
2 7parallel
Strand 4
D
68 72parallel
Strand 5
D
88 92parallel
Strand 6
D
115 121anti-parallel
Strand 7
D
131 137anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
100 101first strand
Strand 2
D
183 184parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
51 53first strand
Strand 2
E
27 34parallel
Strand 3
E
2 7parallel
Strand 4
E
68 71parallel
Strand 5
E
87 92parallel
Strand 6
E
115 121anti-parallel
Strand 7
E
131 137anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
100 101first strand
Strand 2
E
183 184parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
200 202first strand
Strand 2
F
200 202anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
222 224first strand
Strand 2
E
230 239anti-parallel
Strand 3
F
230 239anti-parallel
Strand 4
F
222 224anti-parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
51 52first strand
Strand 2
F
27 33parallel
Strand 3
F
2 7parallel
Strand 4
F
68 72parallel
Strand 5
F
88 92parallel
Strand 6
F
115 121anti-parallel
Strand 7
F
131 137anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
100 101first strand
Strand 2
F
183 184parallel
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There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 52first strand
Strand 2
B
27 33parallel
Strand 3
B
2 7parallel
Strand 4
B
68 72parallel
Strand 5
B
87 92parallel
Strand 6
B
116 121anti-parallel
Strand 7
B
131 136anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 101first strand
Strand 2
B
183 184parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
200 202first strand
Strand 2
A
200 202anti-parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 224first strand
Strand 2
B
230 239anti-parallel
Strand 3
A
230 239anti-parallel
Strand 4
A
222 224anti-parallel
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There are 7 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
27 33parallel
Strand 3
A
2 7parallel
Strand 4
A
68 71parallel
Strand 5
A
87 92parallel
Strand 6
A
115 121anti-parallel
Strand 7
A
131 137anti-parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 101first strand
Strand 2
A
183 184parallel
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There are 6 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
27 32first strand
Strand 2
G
2 7parallel
Strand 3
G
68 72parallel
Strand 4
G
87 92parallel
Strand 5
G
115 121anti-parallel
Strand 6
G
131 137anti-parallel
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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
100 101first strand
Strand 2
G
183 184parallel
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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
200 202first strand
Strand 2
H
200 202anti-parallel
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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
222 224first strand
Strand 2
G
230 239anti-parallel
Strand 3
H
230 240anti-parallel
Strand 4
H
222 224anti-parallel
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There are 7 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
51 52first strand
Strand 2
H
27 33parallel
Strand 3
H
2 7parallel
Strand 4
H
68 72parallel
Strand 5
H
87 92parallel
Strand 6
H
116 121anti-parallel
Strand 7
H
131 136anti-parallel
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There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
100 101first strand
Strand 2
H
183 184parallel
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