Analysis of interatomic Contacts of Structural Units in PDB entry:
4NVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NVT entry

There are 4 chains in PDB entry 4NVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 5ASN 253
B
 ILE 5ARG 252
C
 ILE 5ASN 253
D
 ILE 5ASN 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 61 helices in PDB entry 4NVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 20Right-handed 310
Helix 2
2
A
21 32Right-handed alpha
Helix 3
3
A
35 39Right-handed 310
Helix 4
4
A
50 58Right-handed alpha
Helix 5
5
A
83 91Right-handed alpha
Helix 6
6
A
99 106Right-handed alpha
Helix 7
7
A
109 123Right-handed alpha
Helix 8
8
A
134 140Right-handed alpha
Helix 9
9
A
142 155Right-handed alpha
Helix 10
10
A
170 174Right-handed 310
Helix 11
11
A
181 201Right-handed alpha
Helix 12
12
A
201 207Right-handed alpha
Helix 13
13
A
219 225Right-handed alpha
Helix 14
14
A
235 239Right-handed 310
Helix 15
15
A
240 249Right-handed alpha
Helix 16
16
A
250 252Right-handed 310
Helix 17
17
B
18 20Right-handed 310
Helix 18
18
B
21 33Right-handed alpha
Helix 19
19
B
36 40Right-handed 310
Helix 20
20
B
50 58Right-handed alpha
Helix 21
21
B
83 90Right-handed alpha
Helix 22
22
B
99 106Right-handed alpha
Helix 23
23
B
109 123Right-handed alpha
Helix 24
24
B
134 140Right-handed alpha
Helix 25
25
B
142 155Right-handed alpha
Helix 26
26
B
170 174Right-handed 310
Helix 27
27
B
181 201Right-handed alpha
Helix 28
28
B
201 207Right-handed alpha
Helix 29
29
B
219 225Right-handed alpha
Helix 30
30
B
235 239Right-handed 310
Helix 31
31
B
240 250Right-handed alpha
Helix 32
32
C
18 20Right-handed 310
Helix 33
33
C
21 32Right-handed alpha
Helix 34
34
C
50 59Right-handed alpha
Helix 35
35
C
83 91Right-handed alpha
Helix 36
36
C
99 106Right-handed alpha
Helix 37
37
C
109 124Right-handed alpha
Helix 38
38
C
134 140Right-handed alpha
Helix 39
39
C
142 155Right-handed alpha
Helix 40
40
C
170 174Right-handed 310
Helix 41
41
C
181 201Right-handed alpha
Helix 42
42
C
201 207Right-handed alpha
Helix 43
43
C
219 225Right-handed alpha
Helix 44
44
C
235 239Right-handed 310
Helix 45
45
C
240 250Right-handed alpha
Helix 46
46
D
18 20Right-handed 310
Helix 47
47
D
21 32Right-handed alpha
Helix 48
48
D
34 40Right-handed alpha
Helix 49
49
D
50 58Right-handed alpha
Helix 50
50
D
83 91Right-handed alpha
Helix 51
51
D
99 106Right-handed alpha
Helix 52
52
D
109 124Right-handed alpha
Helix 53
53
D
134 140Right-handed alpha
Helix 54
54
D
142 155Right-handed alpha
Helix 55
55
D
170 174Right-handed 310
Helix 56
56
D
181 201Right-handed alpha
Helix 57
57
D
201 207Right-handed alpha
Helix 58
58
D
216 225Right-handed alpha
Helix 59
59
D
235 239Right-handed 310
Helix 60
60
D
240 250Right-handed alpha
Helix 61
61
D
251 253Right-handed 310
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There are 4 sheets in PDB entry 4NVT. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 12first strand
Strand 2
A
41 45parallel
Strand 3
A
64 67parallel
Strand 4
A
94 97parallel
Strand 5
A
126 131parallel
Strand 6
A
164 168parallel
Strand 7
A
209 211parallel
Strand 8
A
231 234parallel
Strand 9
A
8 12parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
41 45parallel
Strand 3
B
64 67parallel
Strand 4
B
94 97parallel
Strand 5
B
126 131parallel
Strand 6
B
164 168parallel
Strand 7
B
208 211parallel
Strand 8
B
231 234parallel
Strand 9
B
8 12parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 12first strand
Strand 2
C
41 45parallel
Strand 3
C
64 67parallel
Strand 4
C
94 97parallel
Strand 5
C
126 131parallel
Strand 6
C
164 168parallel
Strand 7
C
209 211parallel
Strand 8
C
231 234parallel
Strand 9
C
8 12parallel
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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 12first strand
Strand 2
D
41 45parallel
Strand 3
D
64 67parallel
Strand 4
D
94 97parallel
Strand 5
D
126 131parallel
Strand 6
D
164 168parallel
Strand 7
D
209 211parallel
Strand 8
D
231 234parallel
Strand 9
D
8 12parallel
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