Analysis of interatomic Contacts of Structural Units in PDB entry:
4NW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NW4 entry

There is 1 chain in PDB entry 4NW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 49PHE 321
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 4 helices in PDB entry 4NW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
50 61Right-handed alpha
Helix 2
2
A
78 85Right-handed 310
Helix 3
3
A
195 202Right-handed alpha
Helix 4
4
A
218 226Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 4NW4. Click on sheet of interest to get list of strands forming it: A, B,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 70first strand
Strand 2
A
87 91anti-parallel
Strand 3
A
96 100anti-parallel
Strand 4
A
107 116anti-parallel
Strand 5
A
122 127anti-parallel
Strand 6
A
133 142anti-parallel
Strand 7
A
145 153anti-parallel
Strand 8
A
159 168anti-parallel
Strand 9
A
64 70anti-parallel
Back to list of sheets
Back to top of page

There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
205 212first strand
Strand 2
A
228 232anti-parallel
Strand 3
A
237 241anti-parallel
Strand 4
A
248 258anti-parallel
Strand 5
A
263 268anti-parallel
Strand 6
A
274 284anti-parallel
Strand 7
A
287 295anti-parallel
Strand 8
A
301 310anti-parallel
Strand 9
A
205 212anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il