Analysis of interatomic Contacts of Structural Units in PDB entry:
4NW5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NW5 entry

There is 1 chain in PDB entry 4NW5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 51PRO 359
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 4NW5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 66Right-handed 310
Helix 2
2
A
108 125Right-handed alpha
Helix 3
3
A
154 163Right-handed alpha
Helix 4
4
A
166 187Right-handed alpha
Helix 5
5
A
195 197Right-handed 310
Helix 6
6
A
231 235Right-handed 310
Helix 7
7
A
236 241Right-handed alpha
Helix 8
8
A
247 264Right-handed alpha
Helix 9
9
A
272 283Right-handed alpha
Helix 10
10
A
292 303Right-handed alpha
Helix 11
11
A
306 310Right-handed 310
Helix 12
12
A
318 323Right-handed alpha
Helix 13
13
A
324 328Right-handed 310
Helix 14
14
A
331 337Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4NW5. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 76first strand
Strand 2
A
81 87anti-parallel
Strand 3
A
96 103anti-parallel
Strand 4
A
142 148anti-parallel
Strand 5
A
133 139anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
199 201first strand
Strand 2
A
207 209anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il