Analysis of interatomic Contacts of Structural Units in PDB entry:
4NWO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NWO entry

There are 2 chains in PDB entry 4NWO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3ARG 173
B
 MET 1LEU 114
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4NWO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 17Right-handed alpha
Helix 2
2
A
22 36Right-handed alpha
Helix 3
3
A
50 64Right-handed alpha
Helix 4
4
A
83 92Right-handed alpha
Helix 5
5
A
97 108Right-handed alpha
Helix 6
6
A
111 117Right-handed 310
Helix 7
7
A
135 147Right-handed alpha
Helix 8
8
A
149 156Right-handed alpha
Helix 9
9
B
15 35Right-handed alpha
Helix 10
10
B
38 40Right-handed 310
Helix 11
11
B
57 65Right-handed alpha
Helix 12
12
B
66 70Right-handed 310
Helix 13
13
B
99 103Right-handed 310
Helix 14
14
B
109 114Right-handed 310
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There are 2 sheets in PDB entry 4NWO. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 47first strand
Strand 2
A
4 11parallel
Strand 3
A
69 73parallel
Strand 4
A
127 132parallel
Strand 5
A
121 124anti-parallel
Strand 6
A
94 95anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
42 49parallel
Strand 3
B
87 95anti-parallel
Strand 4
B
2 10anti-parallel
Strand 5
B
106 108parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il