Analysis of interatomic Contacts of Structural Units in PDB entry:
4NWX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NWX entry

There is 1 chain in PDB entry 4NWX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3HIS 505
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 4NWX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 28Right-handed alpha
Helix 2
2
A
30 40Right-handed alpha
Helix 3
3
A
48 53Right-handed 310
Helix 4
4
A
61 72Right-handed alpha
Helix 5
5
A
77 89Right-handed alpha
Helix 6
6
A
90 93Right-handed 310
Helix 7
7
A
94 108Right-handed alpha
Helix 8
8
A
126 139Right-handed alpha
Helix 9
9
A
159 175Right-handed alpha
Helix 10
10
A
185 189Right-handed alpha
Helix 11
11
A
194 206Right-handed alpha
Helix 12
12
A
215 226Right-handed alpha
Helix 13
13
A
229 233Right-handed 310
Helix 14
14
A
261 270Right-handed alpha
Helix 15
15
A
310 318Right-handed alpha
Helix 16
16
A
330 335Right-handed alpha
Helix 17
17
A
361 365Right-handed 310
Helix 18
18
A
369 384Right-handed alpha
Helix 19
19
A
394 401Right-handed alpha
Helix 20
20
A
404 429Right-handed alpha
Helix 21
21
A
477 479Right-handed 310
Helix 22
22
A
480 490Right-handed alpha
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There are 2 sheets in PDB entry 4NWX. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 45first strand
Strand 2
A
461 465anti-parallel
Strand 3
A
432 436anti-parallel
Strand 4
A
6 11parallel
Strand 5
A
388 393parallel
Strand 6
A
322 327parallel
Strand 7
A
349 354parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 213first strand
Strand 2
A
236 238parallel
Strand 3
A
178 184anti-parallel
Strand 4
A
144 150parallel
Strand 5
A
111 116parallel
Strand 6
A
250 253parallel
Strand 7
A
285 288parallel
Strand 8
A
299 300parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il