Analysis of interatomic Contacts of Structural Units in PDB entry:
4NY3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NY3 entry

There are 4 chains in PDB entry 4NY3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 22SER 322
B
 ASN 22SER 322
C
 PRO 305LEU 309
D
 PRO 305LEU 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4NY3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 34Right-handed 310
Helix 2
2
A
35 41Right-handed alpha
Helix 3
3
A
42 59Right-handed alpha
Helix 4
4
A
71 91Right-handed alpha
Helix 5
5
A
103 122Right-handed alpha
Helix 6
6
A
125 130Right-handed 310
Helix 7
7
A
131 141Right-handed alpha
Helix 8
8
A
152 169Right-handed alpha
Helix 9
9
A
173 175Right-handed 310
Helix 10
10
A
176 183Right-handed alpha
Helix 11
11
A
183 199Right-handed alpha
Helix 12
12
A
217 227Right-handed alpha
Helix 13
13
A
234 239Right-handed 310
Helix 14
14
A
240 248Right-handed alpha
Helix 15
15
A
251 264Right-handed alpha
Helix 16
16
A
267 272Right-handed alpha
Helix 17
17
A
272 279Right-handed alpha
Helix 18
18
A
283 299Right-handed alpha
Helix 19
19
A
302 307Right-handed alpha
Helix 20
20
B
32 34Right-handed 310
Helix 21
21
B
35 41Right-handed alpha
Helix 22
22
B
42 59Right-handed alpha
Helix 23
23
B
71 90Right-handed alpha
Helix 24
24
B
103 121Right-handed alpha
Helix 25
25
B
125 130Right-handed 310
Helix 26
26
B
131 141Right-handed alpha
Helix 27
27
B
152 169Right-handed alpha
Helix 28
28
B
173 175Right-handed 310
Helix 29
29
B
176 183Right-handed alpha
Helix 30
30
B
183 199Right-handed alpha
Helix 31
31
B
217 227Right-handed alpha
Helix 32
32
B
234 239Right-handed 310
Helix 33
33
B
240 248Right-handed alpha
Helix 34
34
B
251 264Right-handed alpha
Helix 35
35
B
267 272Right-handed alpha
Helix 36
36
B
272 279Right-handed alpha
Helix 37
37
B
283 299Right-handed alpha
Helix 38
38
B
302 307Right-handed alpha
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There are 4 sheets in PDB entry 4NY3. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
310 311anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 151first strand
Strand 2
A
202 203parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
310 311anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
150 151first strand
Strand 2
B
202 203parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il