Analysis of interatomic Contacts of Structural Units in PDB entry:
4NZ0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4NZ0 entry

There are 3 chains in PDB entry 4NZ0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 1	TRP 460
B	GLY 1	TRP 460
C	GLY 1	ASP 333

There are124 helices in PDB entry 4NZ0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	25	30	Right-handed alpha
Helix 2	2	A	48	56	Right-handed alpha
Helix 3	3	A	66	84	Right-handed alpha
Helix 4	4	A	91	98	Right-handed alpha
Helix 5	5	A	114	119	Right-handed alpha
Helix 6	6	A	121	125	Right-handed alpha
Helix 7	7	A	134	146	Right-handed alpha
Helix 8	8	A	165	170	Right-handed alpha
Helix 9	9	A	180	201	Right-handed alpha
Helix 10	10	A	213	225	Right-handed alpha
Helix 11	11	A	244	255	Right-handed alpha
Helix 12	12	A	265	274	Right-handed alpha
Helix 13	13	A	296	318	Right-handed alpha
Helix 14	14	A	322	324	Right-handed 310
Helix 15	15	A	344	356	Right-handed alpha
Helix 16	16	A	396	405	Right-handed alpha
Helix 17	17	A	411	424	Right-handed alpha
Helix 18	18	A	427	441	Right-handed alpha
Helix 19	19	A	447	458	Right-handed alpha
Helix 20	20	B	25	30	Right-handed alpha
Helix 21	21	B	50	55	Right-handed alpha
Helix 22	22	B	66	79	Right-handed alpha
Helix 23	23	B	91	98	Right-handed alpha
Helix 24	24	B	115	119	Right-handed 310
Helix 25	25	B	121	125	Right-handed alpha
Helix 26	26	B	134	143	Right-handed alpha
Helix 27	27	B	165	171	Right-handed alpha
Helix 28	28	B	180	191	Right-handed alpha
Helix 29	29	B	191	201	Right-handed alpha
Helix 30	30	B	213	225	Right-handed alpha
Helix 31	31	B	244	254	Right-handed alpha
Helix 32	32	B	257	261	Right-handed 310
Helix 33	33	B	265	274	Right-handed alpha
Helix 34	34	B	298	318	Right-handed alpha
Helix 35	35	B	345	356	Right-handed alpha
Helix 36	36	B	396	405	Right-handed alpha
Helix 37	37	B	411	424	Right-handed alpha
Helix 38	38	B	428	435	Right-handed alpha
Helix 39	39	B	435	442	Right-handed alpha
Helix 40	40	B	447	457	Right-handed alpha
Helix 41	41	C	25	30	Right-handed alpha
Helix 42	42	C	48	56	Right-handed alpha
Helix 43	43	C	65	84	Right-handed alpha
Helix 44	44	C	91	98	Right-handed alpha
Helix 45	45	C	114	119	Right-handed alpha
Helix 46	46	C	121	126	Right-handed alpha
Helix 47	47	C	135	140	Right-handed alpha
Helix 48	48	C	165	170	Right-handed alpha
Helix 49	49	C	180	191	Right-handed alpha
Helix 50	50	C	191	201	Right-handed alpha
Helix 51	51	C	213	225	Right-handed alpha
Helix 52	52	C	238	243	Right-handed alpha
Helix 53	53	C	244	254	Right-handed alpha
Helix 54	54	C	265	274	Right-handed alpha
Helix 55	55	C	297	318	Right-handed alpha
Helix 56	56	C	322	324	Right-handed 310
Helix 57	57	C	344	356	Right-handed alpha
Helix 58	58	C	396	405	Right-handed alpha
Helix 59	59	C	411	424	Right-handed alpha
Helix 60	60	C	427	435	Right-handed alpha
Helix 61	61	C	435	441	Right-handed alpha
Helix 62	62	C	447	457	Right-handed alpha
Helix 63	63	D	25	30	Right-handed alpha
Helix 64	64	D	48	55	Right-handed alpha
Helix 65	65	D	66	84	Right-handed alpha
Helix 66	66	D	91	98	Right-handed alpha
Helix 67	67	D	115	119	Right-handed 310
Helix 68	68	D	121	125	Right-handed alpha
Helix 69	69	D	134	146	Right-handed alpha
Helix 70	70	D	165	170	Right-handed alpha
Helix 71	71	D	180	191	Right-handed alpha
Helix 72	72	D	192	201	Right-handed alpha
Helix 73	73	D	213	225	Right-handed alpha
Helix 74	74	D	238	243	Right-handed alpha
Helix 75	75	D	244	254	Right-handed alpha
Helix 76	76	D	257	261	Right-handed 310
Helix 77	77	D	265	274	Right-handed alpha
Helix 78	78	D	298	318	Right-handed alpha
Helix 79	79	D	322	324	Right-handed 310
Helix 80	80	D	344	355	Right-handed alpha
Helix 81	81	D	396	405	Right-handed alpha
Helix 82	82	D	411	424	Right-handed alpha
Helix 83	83	D	427	435	Right-handed alpha
Helix 84	84	D	435	442	Right-handed alpha
Helix 85	85	D	447	457	Right-handed alpha
Helix 86	86	E	24	30	Right-handed alpha
Helix 87	87	E	48	54	Right-handed alpha
Helix 88	88	E	66	83	Right-handed alpha
Helix 89	89	E	91	98	Right-handed alpha
Helix 90	90	E	121	126	Right-handed alpha
Helix 91	91	E	134	146	Right-handed alpha
Helix 92	92	E	165	171	Right-handed alpha
Helix 93	93	E	180	200	Right-handed alpha
Helix 94	94	E	213	225	Right-handed alpha
Helix 95	95	E	244	254	Right-handed alpha
Helix 96	96	E	265	274	Right-handed alpha
Helix 97	97	E	297	318	Right-handed alpha
Helix 98	98	E	322	326	Right-handed 310
Helix 99	99	E	344	356	Right-handed alpha
Helix 100	100	E	373	376	Right-handed 310
Helix 101	101	E	396	405	Right-handed alpha
Helix 102	102	E	411	424	Right-handed alpha
Helix 103	103	E	427	440	Right-handed alpha
Helix 104	104	E	447	458	Right-handed alpha
Helix 105	105	F	25	30	Right-handed alpha
Helix 106	106	F	48	54	Right-handed alpha
Helix 107	107	F	66	84	Right-handed alpha
Helix 108	108	F	91	98	Right-handed alpha
Helix 109	109	F	121	125	Right-handed alpha
Helix 110	110	F	135	146	Right-handed alpha
Helix 111	111	F	165	171	Right-handed alpha
Helix 112	112	F	180	200	Right-handed alpha
Helix 113	113	F	213	225	Right-handed alpha
Helix 114	114	F	238	243	Right-handed alpha
Helix 115	115	F	244	254	Right-handed alpha
Helix 116	116	F	265	274	Right-handed alpha
Helix 117	117	F	297	318	Right-handed alpha
Helix 118	118	F	322	326	Right-handed 310
Helix 119	119	F	344	356	Right-handed alpha
Helix 120	120	F	396	405	Right-handed alpha
Helix 121	121	F	411	424	Right-handed alpha
Helix 122	122	F	427	435	Right-handed alpha
Helix 123	123	F	435	441	Right-handed alpha
Helix 124	124	F	447	458	Right-handed alpha

There are 34 sheets in PDB entry 4NZ0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X, Y, Z, AA, AB, AC, AD, AE, AF, AG, AH,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	6	first strand
Strand 2	A	283	288	anti-parallel
Strand 3	A	275	280	anti-parallel
Strand 4	A	154	158	parallel
Strand 5	A	175	178	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	21	22	first strand
Strand 2	A	406	407	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	35	first strand
Strand 2	A	162	164	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	126	127	first strand
Strand 2	A	132	133	anti-parallel

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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	331	first strand
Strand 2	A	334	339	anti-parallel
Strand 3	A	230	236	anti-parallel
Strand 4	A	359	360	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	382	387	first strand
Strand 2	A	390	395	anti-parallel

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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	4	6	first strand
Strand 2	B	283	288	anti-parallel
Strand 3	B	275	280	anti-parallel
Strand 4	B	154	158	parallel
Strand 5	B	175	178	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	21	22	first strand
Strand 2	B	406	407	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	35	first strand
Strand 2	B	162	164	anti-parallel

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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	126	127	first strand
Strand 2	B	132	133	anti-parallel

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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	327	331	first strand
Strand 2	B	334	338	anti-parallel
Strand 3	B	232	236	anti-parallel
Strand 4	B	359	360	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	382	387	first strand
Strand 2	B	390	395	anti-parallel

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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	6	first strand
Strand 2	C	283	288	anti-parallel
Strand 3	C	275	280	anti-parallel
Strand 4	C	154	158	parallel
Strand 5	C	175	178	anti-parallel

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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	22	first strand
Strand 2	C	406	407	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	33	35	first strand
Strand 2	C	162	164	anti-parallel

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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	326	331	first strand
Strand 2	C	334	339	anti-parallel
Strand 3	C	230	236	anti-parallel
Strand 4	C	359	360	anti-parallel

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There are 2 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	382	387	first strand
Strand 2	C	390	395	anti-parallel

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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	4	6	first strand
Strand 2	D	283	288	anti-parallel
Strand 3	D	275	280	anti-parallel
Strand 4	D	154	158	parallel
Strand 5	D	175	178	anti-parallel

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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	21	22	first strand
Strand 2	D	406	407	anti-parallel

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There are 2 strands in T sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	33	35	first strand
Strand 2	D	162	164	anti-parallel

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There are 2 strands in U sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	126	127	first strand
Strand 2	D	132	133	anti-parallel

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There are 4 strands in V sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	326	331	first strand
Strand 2	D	334	339	anti-parallel
Strand 3	D	230	236	anti-parallel
Strand 4	D	359	360	anti-parallel

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There are 2 strands in W sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	382	387	first strand
Strand 2	D	390	395	anti-parallel

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There are 5 strands in X sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2	6	first strand
Strand 2	E	283	288	anti-parallel
Strand 3	E	275	280	anti-parallel
Strand 4	E	154	158	parallel
Strand 5	E	175	178	anti-parallel

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There are 2 strands in Y sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	21	22	first strand
Strand 2	E	406	407	anti-parallel

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There are 2 strands in Z sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	33	35	first strand
Strand 2	E	162	164	anti-parallel

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There are 4 strands in AA sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	327	331	first strand
Strand 2	E	334	339	anti-parallel
Strand 3	E	230	236	anti-parallel
Strand 4	E	359	361	anti-parallel

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There are 3 strands in AB sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	378	379	first strand
Strand 2	E	382	387	anti-parallel
Strand 3	E	390	395	anti-parallel

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There are 5 strands in AC sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	6	first strand
Strand 2	F	283	288	anti-parallel
Strand 3	F	275	280	anti-parallel
Strand 4	F	154	158	parallel
Strand 5	F	175	178	anti-parallel

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There are 2 strands in AD sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	21	22	first strand
Strand 2	F	406	407	anti-parallel

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There are 2 strands in AE sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	33	35	first strand
Strand 2	F	162	164	anti-parallel

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There are 2 strands in AF sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	126	127	first strand
Strand 2	F	132	133	anti-parallel

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There are 4 strands in AG sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	327	331	first strand
Strand 2	F	334	339	anti-parallel
Strand 3	F	230	237	anti-parallel
Strand 4	F	358	360	anti-parallel

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There are 3 strands in AH sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	378	379	first strand
Strand 2	F	382	387	anti-parallel
Strand 3	F	390	395	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4NZ0

Analysis of interatomic Contacts of Structural Units in PDB entry:
4NZ0