Analysis of interatomic Contacts of Structural Units in PDB entry:
4NZ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NZ2 entry

There are 2 chains in PDB entry 4NZ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 27VAL 490
B
 LYS 27VAL 490
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 4NZ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
41 46Right-handed alpha
Helix 2
2
A
49 62Right-handed alpha
Helix 3
3
A
79 88Right-handed alpha
Helix 4
4
A
100 107Right-handed alpha
Helix 5
5
A
116 131Right-handed alpha
Helix 6
6
A
140 158Right-handed alpha
Helix 7
7
A
166 183Right-handed alpha
Helix 8
8
A
191 209Right-handed alpha
Helix 9
9
A
210 212Right-handed 310
Helix 10
10
A
213 219Right-handed alpha
Helix 11
11
A
221 226Right-handed alpha
Helix 12
12
A
227 255Right-handed alpha
Helix 13
13
A
262 274Right-handed alpha
Helix 14
14
A
283 316Right-handed alpha
Helix 15
15
A
316 331Right-handed alpha
Helix 16
16
A
338 344Right-handed 310
Helix 17
17
A
345 360Right-handed alpha
Helix 18
18
A
391 396Right-handed alpha
Helix 19
19
A
408 413Right-handed 310
Helix 20
20
A
430 434Right-handed 310
Helix 21
21
A
437 455Right-handed alpha
Helix 22
22
B
41 46Right-handed alpha
Helix 23
23
B
49 62Right-handed alpha
Helix 24
24
B
79 88Right-handed alpha
Helix 25
25
B
100 107Right-handed alpha
Helix 26
26
B
117 131Right-handed alpha
Helix 27
27
B
140 158Right-handed alpha
Helix 28
28
B
168 183Right-handed alpha
Helix 29
29
B
191 209Right-handed alpha
Helix 30
30
B
210 212Right-handed 310
Helix 31
31
B
213 219Right-handed alpha
Helix 32
32
B
221 226Right-handed alpha
Helix 33
33
B
227 255Right-handed alpha
Helix 34
34
B
262 273Right-handed alpha
Helix 35
35
B
283 299Right-handed alpha
Helix 36
36
B
299 316Right-handed alpha
Helix 37
37
B
316 331Right-handed alpha
Helix 38
38
B
338 344Right-handed 310
Helix 39
39
B
345 360Right-handed alpha
Helix 40
40
B
390 396Right-handed alpha
Helix 41
41
B
408 413Right-handed 310
Helix 42
42
B
437 455Right-handed alpha
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There are 8 sheets in PDB entry 4NZ2. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
64 69first strand
Strand 2
A
72 77anti-parallel
Strand 3
A
386 389parallel
Strand 4
A
368 369anti-parallel
Strand 5
A
96 97anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
374 376first strand
Strand 2
A
379 381anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
456 460first strand
Strand 2
A
485 489anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 473first strand
Strand 2
A
478 479anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
64 69first strand
Strand 2
B
72 77anti-parallel
Strand 3
B
386 389parallel
Strand 4
B
368 369anti-parallel
Strand 5
B
96 97anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
374 376first strand
Strand 2
B
379 381anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
456 460first strand
Strand 2
B
485 489anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
472 473first strand
Strand 2
B
478 479anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il