Analysis of interatomic Contacts of Structural Units in PDB entry:
4NZQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4NZQ entry

There is 1 chain in PDB entry 4NZQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 34GLU 579
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4NZQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 47Right-handed alpha
Helix 2
2
A
53 62Right-handed alpha
Helix 3
3
A
172 176Right-handed 310
Helix 4
4
A
196 201Right-handed alpha
Helix 5
5
A
251 255Right-handed 310
Helix 6
6
A
289 293Right-handed 310
Helix 7
7
A
308 314Right-handed alpha
Helix 8
8
A
361 364Right-handed 310
Helix 9
9
A
368 371Right-handed 310
Helix 10
10
A
375 377Right-handed 310
Helix 11
11
A
442 452Right-handed alpha
Helix 12
12
A
462 469Right-handed alpha
Helix 13
13
A
489 497Right-handed alpha
Helix 14
14
A
548 552Right-handed 310
Helix 15
15
A
566 576Right-handed alpha
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There are 6 sheets in PDB entry 4NZQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 127first strand
Strand 2
A
135 137anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 232first strand
Strand 2
A
240 242anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
325 326first strand
Strand 2
A
481 486anti-parallel
Strand 3
A
455 460anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 399first strand
Strand 2
A
379 383anti-parallel
Strand 3
A
335 340anti-parallel
Strand 4
A
345 352anti-parallel
Strand 5
A
357 360anti-parallel
Strand 6
A
421 425anti-parallel
Strand 7
A
401 406anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
372 373anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
505 508first strand
Strand 2
A
558 562anti-parallel
Strand 3
A
539 545anti-parallel
Strand 4
A
528 532anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il