Analysis of interatomic Contacts of Structural Units in PDB entry:
4O1P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O1P entry

There are 4 chains in PDB entry 4O1P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 22ASN 729
B
 SER 22ASN 729
C
 SER 22ASN 729
D
 SER 22ASN 729
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are183 helices in PDB entry 4O1P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
23 33Right-handed alpha
Helix 2
2
A
35 45Right-handed alpha
Helix 3
3
A
59 67Right-handed alpha
Helix 4
4
A
69 79Right-handed alpha
Helix 5
5
A
92 101Right-handed alpha
Helix 6
6
A
102 110Right-handed alpha
Helix 7
7
A
111 113Right-handed 310
Helix 8
8
A
125 133Right-handed alpha
Helix 9
9
A
135 145Right-handed alpha
Helix 10
10
A
156 161Right-handed alpha
Helix 11
11
A
168 176Right-handed alpha
Helix 12
12
A
178 188Right-handed alpha
Helix 13
13
A
202 210Right-handed alpha
Helix 14
14
A
212 226Right-handed alpha
Helix 15
15
A
234 238Right-handed 310
Helix 16
16
A
239 247Right-handed alpha
Helix 17
17
A
249 258Right-handed alpha
Helix 18
18
A
273 281Right-handed alpha
Helix 19
19
A
283 293Right-handed alpha
Helix 20
20
A
296 300Right-handed 310
Helix 21
21
A
301 309Right-handed alpha
Helix 22
22
A
311 321Right-handed alpha
Helix 23
23
A
341 351Right-handed alpha
Helix 24
24
A
364 366Right-handed 310
Helix 25
25
A
396 408Right-handed alpha
Helix 26
26
A
439 446Right-handed alpha
Helix 27
27
A
456 476Right-handed alpha
Helix 28
28
A
484 486Right-handed 310
Helix 29
29
A
510 512Right-handed 310
Helix 30
30
A
513 530Right-handed alpha
Helix 31
31
A
535 541Right-handed alpha
Helix 32
32
A
543 550Right-handed alpha
Helix 33
33
A
553 565Right-handed alpha
Helix 34
34
A
572 577Right-handed alpha
Helix 35
35
A
578 584Right-handed 310
Helix 36
36
A
585 597Right-handed alpha
Helix 37
37
A
599 604Right-handed alpha
Helix 38
38
A
609 616Right-handed alpha
Helix 39
39
A
628 633Right-handed alpha
Helix 40
40
A
634 643Right-handed alpha
Helix 41
41
A
666 681Right-handed alpha
Helix 42
42
A
683 685Right-handed 310
Helix 43
43
A
686 694Right-handed alpha
Helix 44
44
A
695 704Right-handed alpha
Helix 45
45
A
706 716Right-handed alpha
Helix 46
46
A
718 724Right-handed 310
Helix 47
47
B
23 33Right-handed alpha
Helix 48
48
B
35 45Right-handed alpha
Helix 49
49
B
59 67Right-handed alpha
Helix 50
50
B
69 79Right-handed alpha
Helix 51
51
B
92 101Right-handed alpha
Helix 52
52
B
102 110Right-handed alpha
Helix 53
53
B
111 113Right-handed 310
Helix 54
54
B
125 133Right-handed alpha
Helix 55
55
B
135 145Right-handed alpha
Helix 56
56
B
156 161Right-handed alpha
Helix 57
57
B
168 176Right-handed alpha
Helix 58
58
B
178 188Right-handed alpha
Helix 59
59
B
202 210Right-handed alpha
Helix 60
60
B
212 226Right-handed alpha
Helix 61
61
B
234 238Right-handed 310
Helix 62
62
B
239 247Right-handed alpha
Helix 63
63
B
249 258Right-handed alpha
Helix 64
64
B
273 281Right-handed alpha
Helix 65
65
B
283 293Right-handed alpha
Helix 66
66
B
296 300Right-handed 310
Helix 67
67
B
301 309Right-handed alpha
Helix 68
68
B
311 321Right-handed alpha
Helix 69
69
B
341 351Right-handed alpha
Helix 70
70
B
364 366Right-handed 310
Helix 71
71
B
396 408Right-handed alpha
Helix 72
72
B
439 446Right-handed alpha
Helix 73
73
B
456 476Right-handed alpha
Helix 74
74
B
484 486Right-handed 310
Helix 75
75
B
510 512Right-handed 310
Helix 76
76
B
513 530Right-handed alpha
Helix 77
77
B
535 541Right-handed alpha
Helix 78
78
B
543 550Right-handed alpha
Helix 79
79
B
553 565Right-handed alpha
Helix 80
80
B
572 577Right-handed alpha
Helix 81
81
B
578 584Right-handed 310
Helix 82
82
B
585 597Right-handed alpha
Helix 83
83
B
599 604Right-handed alpha
Helix 84
84
B
609 616Right-handed alpha
Helix 85
85
B
628 633Right-handed alpha
Helix 86
86
B
634 643Right-handed alpha
Helix 87
87
B
666 681Right-handed alpha
Helix 88
88
B
683 685Right-handed 310
Helix 89
89
B
686 694Right-handed alpha
Helix 90
90
B
695 704Right-handed alpha
Helix 91
91
B
706 716Right-handed alpha
Helix 92
92
B
718 724Right-handed 310
Helix 93
93
C
23 33Right-handed alpha
Helix 94
94
C
35 45Right-handed alpha
Helix 95
95
C
59 67Right-handed alpha
Helix 96
96
C
69 79Right-handed alpha
Helix 97
97
C
92 101Right-handed alpha
Helix 98
98
C
102 110Right-handed alpha
Helix 99
99
C
111 113Right-handed 310
Helix 100
100
C
125 133Right-handed alpha
Helix 101
101
C
135 145Right-handed alpha
Helix 102
102
C
156 161Right-handed alpha
Helix 103
103
C
168 176Right-handed alpha
Helix 104
104
C
178 188Right-handed alpha
Helix 105
105
C
202 210Right-handed alpha
Helix 106
106
C
212 226Right-handed alpha
Helix 107
107
C
234 238Right-handed 310
Helix 108
108
C
239 247Right-handed alpha
Helix 109
109
C
249 258Right-handed alpha
Helix 110
110
C
273 281Right-handed alpha
Helix 111
111
C
283 293Right-handed alpha
Helix 112
112
C
296 300Right-handed 310
Helix 113
113
C
301 309Right-handed alpha
Helix 114
114
C
311 321Right-handed alpha
Helix 115
115
C
341 351Right-handed alpha
Helix 116
116
C
364 366Right-handed 310
Helix 117
117
C
396 408Right-handed alpha
Helix 118
118
C
439 446Right-handed alpha
Helix 119
119
C
456 476Right-handed alpha
Helix 120
120
C
484 486Right-handed 310
Helix 121
121
C
510 512Right-handed 310
Helix 122
122
C
513 530Right-handed alpha
Helix 123
123
C
535 541Right-handed alpha
Helix 124
124
C
543 550Right-handed alpha
Helix 125
125
C
553 565Right-handed alpha
Helix 126
126
C
572 577Right-handed alpha
Helix 127
127
C
578 584Right-handed 310
Helix 128
128
C
585 597Right-handed alpha
Helix 129
129
C
599 604Right-handed alpha
Helix 130
130
C
609 616Right-handed alpha
Helix 131
131
C
628 633Right-handed alpha
Helix 132
132
C
634 643Right-handed alpha
Helix 133
133
C
666 681Right-handed alpha
Helix 134
134
C
683 685Right-handed 310
Helix 135
135
C
686 694Right-handed alpha
Helix 136
136
C
695 704Right-handed alpha
Helix 137
137
C
706 716Right-handed alpha
Helix 138
138
C
718 724Right-handed 310
Helix 139
139
D
23 33Right-handed alpha
Helix 140
140
D
35 45Right-handed alpha
Helix 141
141
D
59 67Right-handed alpha
Helix 142
142
D
69 79Right-handed alpha
Helix 143
143
D
92 101Right-handed alpha
Helix 144
144
D
102 110Right-handed alpha
Helix 145
145
D
111 113Right-handed 310
Helix 146
146
D
125 133Right-handed alpha
Helix 147
147
D
135 145Right-handed alpha
Helix 148
148
D
156 161Right-handed alpha
Helix 149
149
D
168 176Right-handed alpha
Helix 150
150
D
178 188Right-handed alpha
Helix 151
151
D
202 209Right-handed alpha
Helix 152
152
D
212 224Right-handed alpha
Helix 153
153
D
234 238Right-handed 310
Helix 154
154
D
239 247Right-handed alpha
Helix 155
155
D
249 258Right-handed alpha
Helix 156
156
D
273 281Right-handed alpha
Helix 157
157
D
283 293Right-handed alpha
Helix 158
158
D
296 300Right-handed 310
Helix 159
159
D
301 309Right-handed alpha
Helix 160
160
D
311 321Right-handed alpha
Helix 161
161
D
341 351Right-handed alpha
Helix 162
162
D
364 366Right-handed 310
Helix 163
163
D
396 408Right-handed alpha
Helix 164
164
D
439 446Right-handed alpha
Helix 165
165
D
456 476Right-handed alpha
Helix 166
166
D
484 486Right-handed 310
Helix 167
167
D
510 512Right-handed 310
Helix 168
168
D
513 530Right-handed alpha
Helix 169
169
D
535 541Right-handed alpha
Helix 170
170
D
543 550Right-handed alpha
Helix 171
171
D
553 565Right-handed alpha
Helix 172
172
D
575 584Right-handed 310
Helix 173
173
D
585 597Right-handed alpha
Helix 174
174
D
599 604Right-handed alpha
Helix 175
175
D
609 615Right-handed alpha
Helix 176
176
D
628 633Right-handed alpha
Helix 177
177
D
634 643Right-handed alpha
Helix 178
178
D
666 681Right-handed alpha
Helix 179
179
D
683 685Right-handed 310
Helix 180
180
D
686 694Right-handed alpha
Helix 181
181
D
695 704Right-handed alpha
Helix 182
182
D
706 716Right-handed alpha
Helix 183
183
D
718 724Right-handed 310
Back to top of page

There are 16 sheets in PDB entry 4O1P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 360first strand
Strand 2
A
377 382anti-parallel
Strand 3
A
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 360first strand
Strand 2
A
377 382anti-parallel
Strand 3
A
385 393anti-parallel
Strand 4
A
427 433anti-parallel
Strand 5
A
418 423anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
437 438first strand
Strand 2
A
488 490anti-parallel
Strand 3
A
496 498anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
478 479first strand
Strand 2
A
505 506anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 360first strand
Strand 2
B
377 382anti-parallel
Strand 3
B
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 360first strand
Strand 2
B
377 382anti-parallel
Strand 3
B
385 393anti-parallel
Strand 4
B
427 433anti-parallel
Strand 5
B
418 423anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
437 438first strand
Strand 2
B
488 490anti-parallel
Strand 3
B
496 498anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
478 479first strand
Strand 2
B
505 506anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
359 360first strand
Strand 2
C
377 382anti-parallel
Strand 3
C
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
359 360first strand
Strand 2
C
377 382anti-parallel
Strand 3
C
385 393anti-parallel
Strand 4
C
427 433anti-parallel
Strand 5
C
418 423anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
437 438first strand
Strand 2
C
488 490anti-parallel
Strand 3
C
496 498anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
478 479first strand
Strand 2
C
505 506anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
359 360first strand
Strand 2
D
377 382anti-parallel
Strand 3
D
368 370anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
359 360first strand
Strand 2
D
377 382anti-parallel
Strand 3
D
385 393anti-parallel
Strand 4
D
427 433anti-parallel
Strand 5
D
418 423anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
437 438first strand
Strand 2
D
488 490anti-parallel
Strand 3
D
496 498anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
478 479first strand
Strand 2
D
505 506anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il