Analysis of interatomic Contacts of Structural Units in PDB entry:
4O29


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O29 entry

There is 1 chain in PDB entry 4O29 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -1ARG 205
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 4O29. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-1 13Right-handed alpha
Helix 2
2
A
17 27Right-handed alpha
Helix 3
3
A
34 39Right-handed 310
Helix 4
4
A
50 52Right-handed 310
Helix 5
5
A
57 68Right-handed alpha
Helix 6
6
A
84 94Right-handed alpha
Helix 7
7
A
106 120Right-handed alpha
Helix 8
8
A
156 161Right-handed alpha
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There are 2 sheets in PDB entry 4O29. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
47 48first strand
Strand 2
A
54 55anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
126 130first strand
Strand 2
A
98 104parallel
Strand 3
A
74 79parallel
Strand 4
A
143 148parallel
Strand 5
A
163 175parallel
Strand 6
A
178 187anti-parallel
Strand 7
A
190 199anti-parallel
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