Analysis of interatomic Contacts of Structural Units in PDB entry:
4O5M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O5M entry

There are 4 chains in PDB entry 4O5M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -3THR 381
B
 HIS -2ARG 382
C
 HIS -3ARG 382
D
 HIS -3LEU 338
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 4O5M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
6 24Right-handed alpha
Helix 2
2
A
27 35Right-handed alpha
Helix 3
3
A
40 49Right-handed alpha
Helix 4
4
A
56 60Right-handed 310
Helix 5
5
A
65 80Right-handed alpha
Helix 6
6
A
80 92Right-handed alpha
Helix 7
7
A
94 102Right-handed alpha
Helix 8
8
A
103 116Right-handed alpha
Helix 9
9
A
240 246Right-handed alpha
Helix 10
10
A
247 269Right-handed alpha
Helix 11
11
A
277 309Right-handed alpha
Helix 12
12
A
312 339Right-handed alpha
Helix 13
13
A
340 344Right-handed 310
Helix 14
14
A
347 363Right-handed alpha
Helix 15
15
A
369 381Right-handed alpha
Helix 16
16
B
6 24Right-handed alpha
Helix 17
17
B
27 35Right-handed alpha
Helix 18
18
B
40 49Right-handed alpha
Helix 19
19
B
56 60Right-handed 310
Helix 20
20
B
65 80Right-handed alpha
Helix 21
21
B
80 92Right-handed alpha
Helix 22
22
B
94 102Right-handed alpha
Helix 23
23
B
103 116Right-handed alpha
Helix 24
24
B
230 246Right-handed alpha
Helix 25
25
B
247 268Right-handed alpha
Helix 26
26
B
278 309Right-handed alpha
Helix 27
27
B
312 339Right-handed alpha
Helix 28
28
B
340 344Right-handed 310
Helix 29
29
B
348 361Right-handed alpha
Helix 30
30
B
368 381Right-handed alpha
Helix 31
31
C
6 24Right-handed alpha
Helix 32
32
C
27 35Right-handed alpha
Helix 33
33
C
40 49Right-handed alpha
Helix 34
34
C
56 60Right-handed 310
Helix 35
35
C
65 80Right-handed alpha
Helix 36
36
C
80 92Right-handed alpha
Helix 37
37
C
94 102Right-handed alpha
Helix 38
38
C
103 116Right-handed alpha
Helix 39
39
C
230 247Right-handed alpha
Helix 40
40
C
247 268Right-handed alpha
Helix 41
41
C
277 309Right-handed alpha
Helix 42
42
C
312 339Right-handed alpha
Helix 43
43
C
340 344Right-handed 310
Helix 44
44
C
348 362Right-handed alpha
Helix 45
45
C
365 381Right-handed alpha
Helix 46
46
D
6 24Right-handed alpha
Helix 47
47
D
27 35Right-handed alpha
Helix 48
48
D
40 49Right-handed alpha
Helix 49
49
D
56 60Right-handed 310
Helix 50
50
D
65 80Right-handed alpha
Helix 51
51
D
80 92Right-handed alpha
Helix 52
52
D
94 102Right-handed alpha
Helix 53
53
D
103 116Right-handed alpha
Helix 54
54
D
231 247Right-handed alpha
Helix 55
55
D
247 269Right-handed alpha
Helix 56
56
D
276 308Right-handed alpha
Helix 57
57
D
312 339Right-handed alpha
Helix 58
58
D
340 342Right-handed 310
Helix 59
59
D
348 361Right-handed alpha
Helix 60
60
D
371 381Right-handed alpha
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There are 8 sheets in PDB entry 4O5M. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 124first strand
Strand 2
A
165 170parallel
Strand 3
A
182 187anti-parallel
Strand 4
A
224 225anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
139 144first strand
Strand 2
A
147 158anti-parallel
Strand 3
A
209 220anti-parallel
Strand 4
A
193 195anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 124first strand
Strand 2
B
165 169parallel
Strand 3
B
183 187anti-parallel
Strand 4
B
224 225anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 158first strand
Strand 2
B
209 220anti-parallel
Strand 3
B
193 195anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
121 124first strand
Strand 2
C
165 170parallel
Strand 3
C
182 187anti-parallel
Strand 4
C
224 225anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
139 144first strand
Strand 2
C
147 158anti-parallel
Strand 3
C
209 220anti-parallel
Strand 4
C
193 195anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
121 124first strand
Strand 2
D
165 170parallel
Strand 3
D
182 187anti-parallel
Strand 4
D
224 225anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
139 144first strand
Strand 2
D
147 158anti-parallel
Strand 3
D
209 220anti-parallel
Strand 4
D
193 195anti-parallel
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