Analysis of interatomic Contacts of Structural Units in PDB entry:
4O5P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O5P entry

There are 2 chains in PDB entry 4O5P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 3VAL 813
B
 ASN 3THR 812
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 63 helices in PDB entry 4O5P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 33Right-handed alpha
Helix 2
2
A
33 42Right-handed alpha
Helix 3
3
A
75 80Right-handed alpha
Helix 4
4
A
88 96Right-handed alpha
Helix 5
5
A
101 107Right-handed alpha
Helix 6
6
A
121 125Right-handed 310
Helix 7
7
A
136 161Right-handed alpha
Helix 8
8
A
165 177Right-handed alpha
Helix 9
9
A
192 218Right-handed alpha
Helix 10
10
A
235 253Right-handed alpha
Helix 11
11
A
299 301Right-handed 310
Helix 12
12
A
376 382Right-handed alpha
Helix 13
13
A
387 391Right-handed 310
Helix 14
14
A
395 399Right-handed 310
Helix 15
15
A
400 415Right-handed alpha
Helix 16
16
A
438 444Right-handed alpha
Helix 17
17
A
448 462Right-handed alpha
Helix 18
18
A
466 486Right-handed alpha
Helix 19
19
A
489 493Right-handed 310
Helix 20
20
A
494 499Right-handed 310
Helix 21
21
A
504 527Right-handed alpha
Helix 22
22
A
535 549Right-handed alpha
Helix 23
23
A
551 558Right-handed 310
Helix 24
24
A
568 586Right-handed alpha
Helix 25
25
A
613 635Right-handed alpha
Helix 26
26
A
646 656Right-handed alpha
Helix 27
27
A
677 681Right-handed 310
Helix 28
28
A
723 727Right-handed 310
Helix 29
29
A
764 771Right-handed alpha
Helix 30
30
A
776 786Right-handed alpha
Helix 31
31
A
792 797Right-handed alpha
Helix 32
32
A
800 813Right-handed alpha
Helix 33
33
B
21 33Right-handed alpha
Helix 34
34
B
33 41Right-handed alpha
Helix 35
35
B
88 96Right-handed alpha
Helix 36
36
B
101 107Right-handed alpha
Helix 37
37
B
121 125Right-handed 310
Helix 38
38
B
136 161Right-handed alpha
Helix 39
39
B
165 177Right-handed alpha
Helix 40
40
B
192 218Right-handed alpha
Helix 41
41
B
235 252Right-handed alpha
Helix 42
42
B
299 301Right-handed 310
Helix 43
43
B
376 382Right-handed alpha
Helix 44
44
B
387 391Right-handed 310
Helix 45
45
B
395 399Right-handed 310
Helix 46
46
B
400 415Right-handed alpha
Helix 47
47
B
438 444Right-handed alpha
Helix 48
48
B
448 462Right-handed alpha
Helix 49
49
B
466 486Right-handed alpha
Helix 50
50
B
489 493Right-handed 310
Helix 51
51
B
494 499Right-handed 310
Helix 52
52
B
504 527Right-handed alpha
Helix 53
53
B
535 550Right-handed alpha
Helix 54
54
B
552 558Right-handed 310
Helix 55
55
B
568 586Right-handed alpha
Helix 56
56
B
613 635Right-handed alpha
Helix 57
57
B
646 656Right-handed alpha
Helix 58
58
B
677 681Right-handed 310
Helix 59
59
B
723 727Right-handed 310
Helix 60
60
B
764 771Right-handed alpha
Helix 61
61
B
776 786Right-handed alpha
Helix 62
62
B
792 798Right-handed alpha
Helix 63
63
B
800 812Right-handed alpha
Back to top of page

There are 16 sheets in PDB entry 4O5P. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
368 373parallel
Strand 3
A
329 334parallel
Strand 4
A
268 278parallel
Strand 5
A
223 234parallel
Strand 6
A
60 69parallel
Strand 7
A
109 114parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
5 8first strand
Strand 2
A
368 373parallel
Strand 3
A
329 334parallel
Strand 4
A
268 278parallel
Strand 5
A
264 265anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
182 183first strand
Strand 2
A
187 188anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
292 297first strand
Strand 2
A
607 612anti-parallel
Strand 3
A
695 700anti-parallel
Strand 4
A
703 704anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
344 346first strand
Strand 2
A
685 687parallel
Strand 3
A
690 691anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
349 351first strand
Strand 2
A
359 363anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 602first strand
Strand 2
A
713 721anti-parallel
Strand 3
A
747 751anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
636 638first strand
Strand 2
A
641 642anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
368 373parallel
Strand 3
B
329 334parallel
Strand 4
B
268 278parallel
Strand 5
B
224 234parallel
Strand 6
B
61 69parallel
Strand 7
B
109 114parallel
Back to list of sheets
Back to top of page

There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
5 8first strand
Strand 2
B
368 373parallel
Strand 3
B
329 334parallel
Strand 4
B
268 278parallel
Strand 5
B
262 265anti-parallel
Strand 6
B
253 254anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
182 183first strand
Strand 2
B
187 188anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 297first strand
Strand 2
B
607 612anti-parallel
Strand 3
B
695 700anti-parallel
Strand 4
B
703 704anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
344 346first strand
Strand 2
B
685 687parallel
Strand 3
B
690 691anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
349 351first strand
Strand 2
B
359 363anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
594 602first strand
Strand 2
B
713 721anti-parallel
Strand 3
B
747 751anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
636 638first strand
Strand 2
B
641 642anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il