Analysis of interatomic Contacts of Structural Units in PDB entry:
4O63


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O63 entry

There are 4 chains in PDB entry 4O63 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
P
 VAL 1GLU 332
Q
 VAL 1GLU 332
R
 VAL 1GLU 332
O
 VAL 1GLU 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 4O63. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
P
9 23Right-handed alpha
Helix 2
2
P
36 46Right-handed alpha
Helix 3
3
P
78 82Right-handed 310
Helix 4
4
P
83 88Right-handed alpha
Helix 5
5
P
101 106Right-handed alpha
Helix 6
6
P
107 110Right-handed 310
Helix 7
7
P
133 137Right-handed 310
Helix 8
8
P
148 166Right-handed alpha
Helix 9
9
P
192 197Right-handed 310
Helix 10
10
P
198 202Right-handed 310
Helix 11
11
P
213 218Right-handed alpha
Helix 12
12
P
219 222Right-handed 310
Helix 13
13
P
251 265Right-handed alpha
Helix 14
14
P
279 284Right-handed 310
Helix 15
15
P
295 297Right-handed 310
Helix 16
16
P
314 330Right-handed alpha
Helix 17
17
Q
9 20Right-handed alpha
Helix 18
18
Q
36 46Right-handed alpha
Helix 19
19
Q
78 82Right-handed 310
Helix 20
20
Q
83 88Right-handed alpha
Helix 21
21
Q
101 106Right-handed alpha
Helix 22
22
Q
106 111Right-handed alpha
Helix 23
23
Q
133 137Right-handed 310
Helix 24
24
Q
148 166Right-handed alpha
Helix 25
25
Q
192 197Right-handed 310
Helix 26
26
Q
198 202Right-handed 310
Helix 27
27
Q
209 218Right-handed alpha
Helix 28
28
Q
219 222Right-handed 310
Helix 29
29
Q
251 265Right-handed alpha
Helix 30
30
Q
279 284Right-handed 310
Helix 31
31
Q
295 297Right-handed 310
Helix 32
32
Q
314 331Right-handed alpha
Helix 33
33
R
9 20Right-handed alpha
Helix 34
34
R
36 46Right-handed alpha
Helix 35
35
R
78 82Right-handed 310
Helix 36
36
R
83 88Right-handed alpha
Helix 37
37
R
101 106Right-handed alpha
Helix 38
38
R
106 111Right-handed alpha
Helix 39
39
R
133 137Right-handed 310
Helix 40
40
R
148 166Right-handed alpha
Helix 41
41
R
192 197Right-handed 310
Helix 42
42
R
209 218Right-handed alpha
Helix 43
43
R
219 222Right-handed 310
Helix 44
44
R
251 265Right-handed alpha
Helix 45
45
R
279 284Right-handed 310
Helix 46
46
R
314 331Right-handed alpha
Helix 47
47
O
9 23Right-handed alpha
Helix 48
48
O
36 46Right-handed alpha
Helix 49
49
O
78 82Right-handed 310
Helix 50
50
O
83 88Right-handed alpha
Helix 51
51
O
101 111Right-handed alpha
Helix 52
52
O
133 137Right-handed 310
Helix 53
53
O
148 166Right-handed alpha
Helix 54
54
O
192 197Right-handed 310
Helix 55
55
O
209 218Right-handed alpha
Helix 56
56
O
219 222Right-handed 310
Helix 57
57
O
251 265Right-handed alpha
Helix 58
58
O
279 284Right-handed 310
Helix 59
59
O
314 331Right-handed alpha
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There are 12 sheets in PDB entry 4O63. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
57 60first strand
Strand 2
P
63 66anti-parallel
Strand 3
P
69 74anti-parallel
Strand 4
P
26 31parallel
Strand 5
P
2 6parallel
Strand 6
P
91 94parallel
Strand 7
P
115 118parallel
Strand 8
P
143 145parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
204 206first strand
Strand 2
P
225 231anti-parallel
Strand 3
P
167 176parallel
Strand 4
P
238 246anti-parallel
Strand 5
P
304 311anti-parallel
Strand 6
P
290 293anti-parallel
Strand 7
P
271 274parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
P
204 206first strand
Strand 2
P
225 231anti-parallel
Strand 3
P
167 176parallel
Strand 4
P
238 246anti-parallel
Strand 5
P
304 311anti-parallel
Strand 6
P
298 301anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
57 60first strand
Strand 2
Q
63 66anti-parallel
Strand 3
Q
69 74anti-parallel
Strand 4
Q
26 31parallel
Strand 5
Q
2 6parallel
Strand 6
Q
91 94parallel
Strand 7
Q
115 118parallel
Strand 8
Q
143 145parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
204 207first strand
Strand 2
Q
225 232anti-parallel
Strand 3
Q
167 177parallel
Strand 4
Q
238 246anti-parallel
Strand 5
Q
304 311anti-parallel
Strand 6
Q
290 293anti-parallel
Strand 7
Q
271 274parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
Q
204 207first strand
Strand 2
Q
225 232anti-parallel
Strand 3
Q
167 177parallel
Strand 4
Q
238 246anti-parallel
Strand 5
Q
304 311anti-parallel
Strand 6
Q
298 301anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
57 60first strand
Strand 2
R
63 66anti-parallel
Strand 3
R
69 74anti-parallel
Strand 4
R
26 31parallel
Strand 5
R
2 6parallel
Strand 6
R
91 94parallel
Strand 7
R
115 118parallel
Strand 8
R
143 145parallel
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There are 7 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
204 207first strand
Strand 2
R
225 231anti-parallel
Strand 3
R
167 176parallel
Strand 4
R
238 246anti-parallel
Strand 5
R
304 311anti-parallel
Strand 6
R
290 293anti-parallel
Strand 7
R
271 274parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
204 207first strand
Strand 2
R
225 231anti-parallel
Strand 3
R
167 176parallel
Strand 4
R
238 246anti-parallel
Strand 5
R
304 311anti-parallel
Strand 6
R
298 301anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
57 60first strand
Strand 2
O
63 66anti-parallel
Strand 3
O
69 74anti-parallel
Strand 4
O
26 31parallel
Strand 5
O
2 6parallel
Strand 6
O
91 94parallel
Strand 7
O
115 118parallel
Strand 8
O
143 145parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
204 207first strand
Strand 2
O
225 232anti-parallel
Strand 3
O
167 177parallel
Strand 4
O
238 246anti-parallel
Strand 5
O
304 311anti-parallel
Strand 6
O
290 293anti-parallel
Strand 7
O
271 274parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
204 207first strand
Strand 2
O
225 232anti-parallel
Strand 3
O
167 177parallel
Strand 4
O
238 246anti-parallel
Strand 5
O
304 311anti-parallel
Strand 6
O
298 301anti-parallel
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