Analysis of interatomic Contacts of Structural Units in PDB entry:
4O64


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O64 entry

There are 3 chains in PDB entry 4O64 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 608ASN 723
B
 ARG 608ASN 723
C
 ARG 608ASN 723
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 4O64. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
616 621Right-handed alpha
Helix 2
2
A
627 633Right-handed alpha
Helix 3
3
A
634 637Right-handed 310
Helix 4
4
A
646 650Right-handed 310
Helix 5
5
A
670 674Right-handed 310
Helix 6
6
A
676 683Right-handed alpha
Helix 7
7
A
696 700Right-handed 310
Helix 8
8
B
616 621Right-handed alpha
Helix 9
9
B
627 633Right-handed alpha
Helix 10
10
B
634 637Right-handed 310
Helix 11
11
B
646 650Right-handed 310
Helix 12
12
B
676 683Right-handed alpha
Helix 13
13
B
696 700Right-handed 310
Helix 14
14
C
616 621Right-handed alpha
Helix 15
15
C
627 633Right-handed alpha
Helix 16
16
C
634 637Right-handed 310
Helix 17
17
C
646 650Right-handed 310
Helix 18
18
C
670 674Right-handed 310
Helix 19
19
C
676 683Right-handed alpha
Helix 20
20
C
696 700Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 4O64. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
694 695first strand
Strand 2
A
686 688anti-parallel
Strand 3
A
716 718parallel
Strand 4
A
708 709anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
694 695first strand
Strand 2
B
686 688anti-parallel
Strand 3
B
716 718parallel
Strand 4
B
708 709anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
694 695first strand
Strand 2
C
686 688anti-parallel
Strand 3
C
716 718parallel
Strand 4
C
708 709anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il