Analysis of interatomic Contacts of Structural Units in PDB entry:
4O68


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O68 entry

There is 1 chain in PDB entry 4O68 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 162PHE 519
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 4O68. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
162 175Right-handed alpha
Helix 2
2
A
181 200Right-handed alpha
Helix 3
3
A
201 204Right-handed 310
Helix 4
4
A
260 264Right-handed 310
Helix 5
5
A
272 288Right-handed alpha
Helix 6
6
A
331 335Right-handed 310
Helix 7
7
A
345 353Right-handed alpha
Helix 8
8
A
379 388Right-handed alpha
Helix 9
9
A
405 424Right-handed alpha
Helix 10
10
A
434 449Right-handed alpha
Helix 11
11
A
451 458Right-handed 310
Helix 12
12
A
459 477Right-handed alpha
Helix 13
13
A
497 514Right-handed alpha
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There are 3 sheets in PDB entry 4O68. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
225 233anti-parallel
Strand 3
A
316 326parallel
Strand 4
A
357 361anti-parallel
Strand 5
A
375 378anti-parallel
Strand 6
A
248 252anti-parallel
Strand 7
A
238 241anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
206 208first strand
Strand 2
A
225 233anti-parallel
Strand 3
A
316 326parallel
Strand 4
A
308 312anti-parallel
Strand 5
A
296 299anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
266 267first strand
Strand 2
A
270 271anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il