Analysis of interatomic Contacts of Structural Units in PDB entry:
4O6H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4O6H entry

There are 8 chains in PDB entry 4O6H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	VAL 356	LEU 558
B	GLN 355	LEU 558
C	VAL 356	LEU 558
D	GLN 355	LEU 558
E	VAL 356	LEU 558
F	VAL 356	LEU 558
G	VAL 356	LEU 558
H	VAL 356	LEU 558

There are 83 helices in PDB entry 4O6H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	359	370	Right-handed alpha
Helix 2	2	A	371	373	Right-handed 310
Helix 3	3	A	412	423	Right-handed alpha
Helix 4	4	A	427	432	Right-handed alpha
Helix 5	5	A	437	446	Right-handed alpha
Helix 6	6	A	456	467	Right-handed alpha
Helix 7	7	A	480	496	Right-handed alpha
Helix 8	8	A	497	499	Right-handed 310
Helix 9	9	A	509	511	Right-handed 310
Helix 10	10	A	518	532	Right-handed alpha
Helix 11	11	A	545	550	Right-handed alpha
Helix 12	12	B	359	370	Right-handed alpha
Helix 13	13	B	371	373	Right-handed 310
Helix 14	14	B	412	423	Right-handed alpha
Helix 15	15	B	427	432	Right-handed 310
Helix 16	16	B	437	445	Right-handed alpha
Helix 17	17	B	456	467	Right-handed alpha
Helix 18	18	B	480	496	Right-handed alpha
Helix 19	19	B	497	499	Right-handed 310
Helix 20	20	B	518	532	Right-handed alpha
Helix 21	21	B	545	550	Right-handed alpha
Helix 22	22	C	359	370	Right-handed alpha
Helix 23	23	C	371	373	Right-handed 310
Helix 24	24	C	412	423	Right-handed alpha
Helix 25	25	C	437	446	Right-handed alpha
Helix 26	26	C	456	466	Right-handed alpha
Helix 27	27	C	487	496	Right-handed alpha
Helix 28	28	C	497	499	Right-handed 310
Helix 29	29	C	518	532	Right-handed alpha
Helix 30	30	C	545	550	Right-handed alpha
Helix 31	31	D	359	370	Right-handed alpha
Helix 32	32	D	371	373	Right-handed 310
Helix 33	33	D	412	423	Right-handed alpha
Helix 34	34	D	427	432	Right-handed alpha
Helix 35	35	D	437	446	Right-handed alpha
Helix 36	36	D	456	466	Right-handed alpha
Helix 37	37	D	482	486	Right-handed 310
Helix 38	38	D	487	496	Right-handed alpha
Helix 39	39	D	497	499	Right-handed 310
Helix 40	40	D	518	530	Right-handed alpha
Helix 41	41	D	545	550	Right-handed alpha
Helix 42	42	E	359	370	Right-handed alpha
Helix 43	43	E	371	373	Right-handed 310
Helix 44	44	E	412	423	Right-handed alpha
Helix 45	45	E	427	434	Right-handed 310
Helix 46	46	E	437	446	Right-handed alpha
Helix 47	47	E	456	467	Right-handed alpha
Helix 48	48	E	480	495	Right-handed alpha
Helix 49	49	E	496	499	Right-handed 310
Helix 50	50	E	518	532	Right-handed alpha
Helix 51	51	E	545	550	Right-handed alpha
Helix 52	52	F	359	370	Right-handed alpha
Helix 53	53	F	371	373	Right-handed 310
Helix 54	54	F	412	423	Right-handed alpha
Helix 55	55	F	427	431	Right-handed 310
Helix 56	56	F	437	446	Right-handed alpha
Helix 57	57	F	456	467	Right-handed alpha
Helix 58	58	F	480	495	Right-handed alpha
Helix 59	59	F	496	499	Right-handed 310
Helix 60	60	F	518	532	Right-handed alpha
Helix 61	61	F	545	550	Right-handed alpha
Helix 62	62	G	359	370	Right-handed alpha
Helix 63	63	G	371	373	Right-handed 310
Helix 64	64	G	412	423	Right-handed alpha
Helix 65	65	G	427	431	Right-handed 310
Helix 66	66	G	437	446	Right-handed alpha
Helix 67	67	G	456	466	Right-handed alpha
Helix 68	68	G	480	485	Right-handed alpha
Helix 69	69	G	487	496	Right-handed alpha
Helix 70	70	G	497	499	Right-handed 310
Helix 71	71	G	518	530	Right-handed alpha
Helix 72	72	G	545	550	Right-handed alpha
Helix 73	73	H	359	370	Right-handed alpha
Helix 74	74	H	371	373	Right-handed 310
Helix 75	75	H	412	423	Right-handed alpha
Helix 76	76	H	427	431	Right-handed 310
Helix 77	77	H	437	446	Right-handed alpha
Helix 78	78	H	456	466	Right-handed alpha
Helix 79	79	H	480	485	Right-handed alpha
Helix 80	80	H	487	496	Right-handed alpha
Helix 81	81	H	497	499	Right-handed 310
Helix 82	82	H	518	530	Right-handed alpha
Helix 83	83	H	545	550	Right-handed alpha

There are 12 sheets in PDB entry 4O6H. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	473	476	first strand
Strand 2	A	451	454	parallel
Strand 3	A	379	386	parallel
Strand 4	A	389	396	anti-parallel
Strand 5	A	402	407	anti-parallel
Strand 6	A	541	542	parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	506	507	first strand
Strand 2	A	513	514	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	473	476	first strand
Strand 2	B	451	454	parallel
Strand 3	B	379	386	parallel
Strand 4	B	389	396	anti-parallel
Strand 5	B	402	407	anti-parallel
Strand 6	B	541	542	parallel

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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	473	476	first strand
Strand 2	C	451	454	parallel
Strand 3	C	379	386	parallel
Strand 4	C	389	396	anti-parallel
Strand 5	C	402	407	anti-parallel
Strand 6	C	541	542	parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	506	507	first strand
Strand 2	C	513	514	anti-parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	473	476	first strand
Strand 2	D	451	454	parallel
Strand 3	D	379	386	parallel
Strand 4	D	389	396	anti-parallel
Strand 5	D	402	407	anti-parallel
Strand 6	D	541	542	parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	506	507	first strand
Strand 2	D	513	514	anti-parallel

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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	473	476	first strand
Strand 2	E	451	454	parallel
Strand 3	E	379	385	parallel
Strand 4	E	390	396	anti-parallel
Strand 5	E	402	407	anti-parallel
Strand 6	E	541	542	parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	473	476	first strand
Strand 2	F	451	454	parallel
Strand 3	F	379	386	parallel
Strand 4	F	389	396	anti-parallel
Strand 5	F	402	407	anti-parallel
Strand 6	F	541	542	parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	473	476	first strand
Strand 2	G	451	454	parallel
Strand 3	G	379	384	parallel
Strand 4	G	392	396	anti-parallel
Strand 5	G	402	407	anti-parallel
Strand 6	G	541	542	parallel

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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	506	507	first strand
Strand 2	G	513	514	anti-parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	473	476	first strand
Strand 2	H	451	454	parallel
Strand 3	H	379	386	parallel
Strand 4	H	389	396	anti-parallel
Strand 5	H	402	407	anti-parallel
Strand 6	H	541	542	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4O6H

Analysis of interatomic Contacts of Structural Units in PDB entry:
4O6H