Analysis of interatomic Contacts of Structural Units in PDB entry:
4O6O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O6O entry

There are 4 chains in PDB entry 4O6O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 0VAL 196
B
 TYR 0VAL 196
C
 TYR 0VAL 196
D
 MET -2VAL 196
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 4O6O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 14Right-handed alpha
Helix 2
2
A
19 31Right-handed alpha
Helix 3
3
A
34 52Right-handed alpha
Helix 4
4
A
85 95Right-handed alpha
Helix 5
5
A
116 120Right-handed 310
Helix 6
6
A
122 132Right-handed alpha
Helix 7
7
A
144 158Right-handed alpha
Helix 8
8
A
182 192Right-handed alpha
Helix 9
9
B
2 6Right-handed 310
Helix 10
10
B
7 13Right-handed alpha
Helix 11
11
B
19 33Right-handed alpha
Helix 12
12
B
34 51Right-handed alpha
Helix 13
13
B
85 93Right-handed alpha
Helix 14
14
B
94 96Right-handed 310
Helix 15
15
B
116 120Right-handed 310
Helix 16
16
B
121 128Right-handed alpha
Helix 17
17
B
144 158Right-handed alpha
Helix 18
18
B
182 192Right-handed alpha
Helix 19
19
C
2 14Right-handed alpha
Helix 20
20
C
21 31Right-handed alpha
Helix 21
21
C
34 51Right-handed alpha
Helix 22
22
C
85 93Right-handed alpha
Helix 23
23
C
110 114Right-handed 310
Helix 24
24
C
122 131Right-handed alpha
Helix 25
25
C
144 156Right-handed alpha
Helix 26
26
C
182 192Right-handed alpha
Helix 27
27
D
4 13Right-handed alpha
Helix 28
28
D
19 32Right-handed alpha
Helix 29
29
D
34 51Right-handed alpha
Helix 30
30
D
67 72Right-handed alpha
Helix 31
31
D
85 95Right-handed alpha
Helix 32
32
D
122 128Right-handed alpha
Helix 33
33
D
144 158Right-handed alpha
Helix 34
34
D
182 192Right-handed alpha
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There are 6 sheets in PDB entry 4O6O. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
61 62anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 83first strand
Strand 2
A
101 104parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
101 103first strand
Strand 2
B
79 82parallel
Strand 3
B
136 139parallel
Strand 4
B
164 167parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
61 62anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
100 104first strand
Strand 2
C
76 83parallel
Strand 3
C
136 139parallel
Strand 4
C
165 167parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
194 195first strand
Strand 2
D
164 167anti-parallel
Strand 3
D
136 139parallel
Strand 4
D
79 83parallel
Strand 5
D
101 104parallel
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