Analysis of interatomic Contacts of Structural Units in PDB entry:
4O6P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O6P entry

There are 2 chains in PDB entry 4O6P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 TYR 0VAL 196
C
 TYR 0GLU 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 4O6P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
2 15Right-handed alpha
Helix 2
2
B
19 33Right-handed alpha
Helix 3
3
B
34 52Right-handed alpha
Helix 4
4
B
85 95Right-handed alpha
Helix 5
5
B
121 132Right-handed alpha
Helix 6
6
B
144 159Right-handed alpha
Helix 7
7
B
182 191Right-handed alpha
Helix 8
8
C
2 14Right-handed alpha
Helix 9
9
C
19 33Right-handed alpha
Helix 10
10
C
34 52Right-handed alpha
Helix 11
11
C
86 94Right-handed alpha
Helix 12
12
C
144 156Right-handed alpha
Helix 13
13
C
157 159Right-handed 310
Helix 14
14
C
182 192Right-handed alpha
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There are 4 sheets in PDB entry 4O6P. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
53 54first strand
Strand 2
B
61 62anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
76 83parallel
Strand 3
B
136 140parallel
Strand 4
B
164 167parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
53 54first strand
Strand 2
C
61 62anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
79 83first strand
Strand 2
C
136 140parallel
Strand 3
C
164 167parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il