Analysis of interatomic Contacts of Structural Units in PDB entry:
4O8W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4O8W entry

There are 6 chains in PDB entry 4O8W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 69LYS 178
B
 LEU 63VAL 179
C
 VAL 64ALA 176
D
 LYS 60VAL 179
E
 GLN 61ALA 175
F
 ASP 66GLN 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 45 helices in PDB entry 4O8W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
69 79Right-handed alpha
Helix 2
2
A
80 91Right-handed alpha
Helix 3
3
A
93 116Right-handed alpha
Helix 4
4
A
118 130Right-handed alpha
Helix 5
5
A
131 143Right-handed alpha
Helix 6
6
A
144 161Right-handed alpha
Helix 7
7
A
161 178Right-handed alpha
Helix 8
8
B
64 78Right-handed alpha
Helix 9
9
B
80 91Right-handed alpha
Helix 10
10
B
93 104Right-handed alpha
Helix 11
11
B
104 117Right-handed alpha
Helix 12
12
B
118 130Right-handed alpha
Helix 13
13
B
131 143Right-handed alpha
Helix 14
14
B
144 160Right-handed alpha
Helix 15
15
B
161 179Right-handed alpha
Helix 16
16
C
67 79Right-handed alpha
Helix 17
17
C
80 91Right-handed alpha
Helix 18
18
C
93 104Right-handed alpha
Helix 19
19
C
104 116Right-handed alpha
Helix 20
20
C
118 130Right-handed alpha
Helix 21
21
C
131 143Right-handed alpha
Helix 22
22
C
144 160Right-handed alpha
Helix 23
23
C
161 176Right-handed alpha
Helix 24
24
D
66 80Right-handed alpha
Helix 25
25
D
81 91Right-handed alpha
Helix 26
26
D
93 104Right-handed alpha
Helix 27
27
D
104 116Right-handed alpha
Helix 28
28
D
118 130Right-handed alpha
Helix 29
29
D
131 143Right-handed alpha
Helix 30
30
D
144 161Right-handed alpha
Helix 31
31
D
161 179Right-handed alpha
Helix 32
32
E
66 79Right-handed alpha
Helix 33
33
E
80 92Right-handed alpha
Helix 34
34
E
93 117Right-handed alpha
Helix 35
35
E
118 130Right-handed alpha
Helix 36
36
E
131 144Right-handed alpha
Helix 37
37
E
144 160Right-handed alpha
Helix 38
38
E
161 175Right-handed alpha
Helix 39
39
F
67 80Right-handed alpha
Helix 40
40
F
80 91Right-handed alpha
Helix 41
41
F
93 116Right-handed alpha
Helix 42
42
F
118 130Right-handed alpha
Helix 43
43
F
131 143Right-handed alpha
Helix 44
44
F
144 161Right-handed alpha
Helix 45
45
F
161 178Right-handed alpha
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There are no sheets in PDB entry 4O8W
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il