Analysis of interatomic Contacts of Structural Units in PDB entry:
4OAV

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4OAV entry

There are 3 chains in PDB entry 4OAV (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	GLU 24	PRO 717
A	A 3	A 6
D	ASN 26	GLU 613

There are 78 helices in PDB entry 4OAV. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	B	24	35	Right-handed alpha
Helix 2	2	B	37	47	Right-handed alpha
Helix 3	3	B	61	69	Right-handed alpha
Helix 4	4	B	71	81	Right-handed alpha
Helix 5	5	B	94	103	Right-handed alpha
Helix 6	6	B	104	113	Right-handed alpha
Helix 7	7	B	127	135	Right-handed alpha
Helix 8	8	B	137	147	Right-handed alpha
Helix 9	9	B	158	164	Right-handed alpha
Helix 10	10	B	170	178	Right-handed alpha
Helix 11	11	B	180	191	Right-handed alpha
Helix 12	12	B	204	210	Right-handed alpha
Helix 13	13	B	217	228	Right-handed alpha
Helix 14	14	B	241	249	Right-handed alpha
Helix 15	15	B	251	260	Right-handed alpha
Helix 16	16	B	275	283	Right-handed alpha
Helix 17	17	B	285	295	Right-handed alpha
Helix 18	18	B	303	311	Right-handed alpha
Helix 19	19	B	313	323	Right-handed alpha
Helix 20	20	B	344	353	Right-handed alpha
Helix 21	21	B	366	368	Right-handed 310
Helix 22	22	B	398	410	Right-handed alpha
Helix 23	23	B	441	446	Right-handed alpha
Helix 24	24	B	458	478	Right-handed alpha
Helix 25	25	B	487	489	Right-handed 310
Helix 26	26	B	513	533	Right-handed alpha
Helix 27	27	B	538	545	Right-handed alpha
Helix 28	28	B	546	552	Right-handed alpha
Helix 29	29	B	556	568	Right-handed alpha
Helix 30	30	B	575	581	Right-handed alpha
Helix 31	31	B	582	587	Right-handed 310
Helix 32	32	B	588	601	Right-handed alpha
Helix 33	33	B	602	607	Right-handed alpha
Helix 34	34	B	612	619	Right-handed alpha
Helix 35	35	B	631	635	Right-handed 310
Helix 36	36	B	637	646	Right-handed alpha
Helix 37	37	B	647	649	Right-handed 310
Helix 38	38	B	658	673	Right-handed alpha
Helix 39	39	B	681	686	Right-handed alpha
Helix 40	40	B	687	696	Right-handed alpha
Helix 41	41	B	698	708	Right-handed alpha
Helix 42	42	B	710	716	Right-handed 310
Helix 43	43	D	27	35	Right-handed alpha
Helix 44	44	D	37	47	Right-handed alpha
Helix 45	45	D	61	69	Right-handed alpha
Helix 46	46	D	71	81	Right-handed alpha
Helix 47	47	D	94	103	Right-handed alpha
Helix 48	48	D	104	113	Right-handed alpha
Helix 49	49	D	127	135	Right-handed alpha
Helix 50	50	D	137	147	Right-handed alpha
Helix 51	53	D	180	191	Right-handed alpha
Helix 52	54	D	204	210	Right-handed alpha
Helix 53	56	D	241	249	Right-handed alpha
Helix 54	57	D	251	260	Right-handed alpha
Helix 55	58	D	275	283	Right-handed alpha
Helix 56	59	D	285	295	Right-handed alpha
Helix 57	60	D	303	311	Right-handed alpha
Helix 58	61	D	313	323	Right-handed alpha
Helix 59	64	D	398	410	Right-handed alpha
Helix 60	65	D	441	447	Right-handed alpha
Helix 61	66	D	458	478	Right-handed alpha
Helix 62	67	D	487	489	Right-handed 310
Helix 63	68	D	513	533	Right-handed alpha
Helix 64	69	D	538	545	Right-handed alpha
Helix 65	70	D	546	552	Right-handed alpha
Helix 66	71	D	556	568	Right-handed alpha
Helix 67	72	D	575	581	Right-handed alpha
Helix 68	73	D	582	587	Right-handed 310
Helix 69	74	D	588	601	Right-handed alpha
Helix 70	75	D	602	607	Right-handed alpha
Helix 71	76	D	612	619	Right-handed alpha
Helix 72	77	D	631	635	Right-handed 310
Helix 73	78	D	638	646	Right-handed alpha
Helix 74	79	D	647	649	Right-handed 310
Helix 75	80	D	658	675	Right-handed alpha
Helix 76	81	D	682	686	Right-handed alpha
Helix 77	82	D	687	696	Right-handed alpha
Helix 78	83	D	698	708	Right-handed alpha

There are 7 sheets in PDB entry 4OAV. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	363	first strand
Strand 2	B	377	383	anti-parallel
Strand 3	B	370	374	anti-parallel

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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	362	363	first strand
Strand 2	B	377	383	anti-parallel
Strand 3	B	388	395	anti-parallel
Strand 4	B	429	435	anti-parallel
Strand 5	B	420	425	anti-parallel

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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	439	440	first strand
Strand 2	B	491	493	anti-parallel
Strand 3	B	499	501	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	481	482	first strand
Strand 2	B	508	509	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	362	363	first strand
Strand 2	D	370	374	anti-parallel

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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	362	363	first strand
Strand 2	D	388	395	anti-parallel
Strand 3	D	429	435	anti-parallel
Strand 4	D	420	425	anti-parallel

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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	439	440	first strand
Strand 2	D	491	493	anti-parallel
Strand 3	D	499	501	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4OAV

Analysis of interatomic Contacts of Structural Units in PDB entry:
4OAV