Analysis of interatomic Contacts of Structural Units in PDB entry:
4OAY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OAY entry

There are 12 chains in PDB entry 4OAY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 82VAL 161
B
 PRO 83ALA 155
K
 PRO 83VAL 161
J
 PRO 83VAL 161
R
 PRO 83VAL 161
H
 PRO 83ARG 158
E
 PRO 83ARG 158
G
 PRO 83ARG 158
F
 PRO 83ARG 158
D
 PRO 83VAL 161
N
 PRO 83VAL 161
M
 PRO 83ARG 158
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 4OAY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
89 95Right-handed alpha
Helix 2
2
A
96 115Right-handed alpha
Helix 3
3
A
127 137Right-handed alpha
Helix 4
4
A
139 150Right-handed alpha
Helix 5
5
A
154 161Right-handed 310
Helix 6
6
B
89 95Right-handed alpha
Helix 7
7
B
96 115Right-handed alpha
Helix 8
8
B
126 137Right-handed alpha
Helix 9
9
B
139 150Right-handed alpha
Helix 10
10
K
89 95Right-handed alpha
Helix 11
11
K
96 115Right-handed alpha
Helix 12
12
K
127 137Right-handed alpha
Helix 13
13
K
139 149Right-handed alpha
Helix 14
14
K
154 161Right-handed 310
Helix 15
15
J
89 95Right-handed alpha
Helix 16
16
J
96 115Right-handed alpha
Helix 17
17
J
125 136Right-handed alpha
Helix 18
18
J
139 150Right-handed alpha
Helix 19
19
J
156 161Right-handed alpha
Helix 20
20
R
89 94Right-handed alpha
Helix 21
21
R
96 115Right-handed alpha
Helix 22
22
R
125 137Right-handed alpha
Helix 23
23
R
139 150Right-handed alpha
Helix 24
24
R
154 161Right-handed 310
Helix 25
25
H
89 94Right-handed alpha
Helix 26
26
H
96 115Right-handed alpha
Helix 27
27
H
125 137Right-handed alpha
Helix 28
28
H
139 150Right-handed alpha
Helix 29
29
H
154 158Right-handed 310
Helix 30
30
E
89 95Right-handed alpha
Helix 31
31
E
96 115Right-handed alpha
Helix 32
32
E
127 137Right-handed alpha
Helix 33
33
E
139 150Right-handed alpha
Helix 34
34
E
154 158Right-handed 310
Helix 35
35
G
89 95Right-handed alpha
Helix 36
36
G
96 115Right-handed alpha
Helix 37
37
G
127 137Right-handed alpha
Helix 38
38
G
139 150Right-handed alpha
Helix 39
39
G
154 158Right-handed 310
Helix 40
40
F
89 95Right-handed alpha
Helix 41
41
F
96 115Right-handed alpha
Helix 42
42
F
125 136Right-handed alpha
Helix 43
43
F
139 150Right-handed alpha
Helix 44
44
F
154 158Right-handed 310
Helix 45
45
D
89 95Right-handed alpha
Helix 46
46
D
96 115Right-handed alpha
Helix 47
47
D
127 137Right-handed alpha
Helix 48
48
D
139 150Right-handed alpha
Helix 49
49
D
154 160Right-handed 310
Helix 50
50
N
89 95Right-handed alpha
Helix 51
51
N
96 115Right-handed alpha
Helix 52
52
N
127 137Right-handed alpha
Helix 53
53
N
139 150Right-handed alpha
Helix 54
54
N
154 161Right-handed 310
Helix 55
55
M
89 94Right-handed alpha
Helix 56
56
M
96 115Right-handed alpha
Helix 57
57
M
125 137Right-handed alpha
Helix 58
58
M
139 150Right-handed alpha
Helix 59
59
M
154 158Right-handed 310
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There are 12 sheets in PDB entry 4OAY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
86 88first strand
Strand 2
A
121 123anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 88first strand
Strand 2
B
121 124anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
86 88first strand
Strand 2
K
121 123anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
85 88first strand
Strand 2
J
121 124anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
R
86 88first strand
Strand 2
R
121 123anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
86 88first strand
Strand 2
H
121 123anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
86 88first strand
Strand 2
E
121 123anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
85 88first strand
Strand 2
G
121 124anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
86 88first strand
Strand 2
F
121 123anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
86 88first strand
Strand 2
D
121 123anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
85 88first strand
Strand 2
N
121 124anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
86 88first strand
Strand 2
M
121 123anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il