Analysis of interatomic Contacts of Structural Units in PDB entry:
4OBW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OBW entry

There are 4 chains in PDB entry 4OBW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 74VAL 307
D
 SER 73VAL 307
C
 SER 73VAL 307
B
 ASN 76VAL 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 4OBW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
74 87Right-handed alpha
Helix 2
2
A
89 102Right-handed alpha
Helix 3
3
A
123 138Right-handed alpha
Helix 4
4
A
150 165Right-handed alpha
Helix 5
5
A
199 203Right-handed 310
Helix 6
6
A
205 216Right-handed alpha
Helix 7
7
A
233 255Right-handed alpha
Helix 8
8
A
257 270Right-handed alpha
Helix 9
9
A
273 284Right-handed alpha
Helix 10
10
A
295 297Right-handed 310
Helix 11
11
D
74 87Right-handed alpha
Helix 12
12
D
89 102Right-handed alpha
Helix 13
13
D
123 138Right-handed alpha
Helix 14
14
D
150 165Right-handed alpha
Helix 15
15
D
199 203Right-handed 310
Helix 16
16
D
205 216Right-handed alpha
Helix 17
17
D
233 254Right-handed alpha
Helix 18
18
D
257 271Right-handed alpha
Helix 19
19
D
273 284Right-handed alpha
Helix 20
20
C
74 86Right-handed alpha
Helix 21
21
C
89 102Right-handed alpha
Helix 22
22
C
123 138Right-handed alpha
Helix 23
23
C
150 165Right-handed alpha
Helix 24
24
C
199 203Right-handed 310
Helix 25
25
C
205 216Right-handed alpha
Helix 26
26
C
233 256Right-handed alpha
Helix 27
27
C
257 271Right-handed alpha
Helix 28
28
C
273 284Right-handed alpha
Helix 29
29
B
77 86Right-handed alpha
Helix 30
30
B
89 102Right-handed alpha
Helix 31
31
B
123 138Right-handed alpha
Helix 32
32
B
150 165Right-handed alpha
Helix 33
33
B
199 203Right-handed 310
Helix 34
34
B
205 216Right-handed alpha
Helix 35
35
B
233 256Right-handed alpha
Helix 36
36
B
257 271Right-handed alpha
Helix 37
37
B
273 284Right-handed alpha
Helix 38
38
B
295 297Right-handed 310
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There are 4 sheets in PDB entry 4OBW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
173 177first strand
Strand 2
A
143 148parallel
Strand 3
A
114 118parallel
Strand 4
A
191 197parallel
Strand 5
A
217 228parallel
Strand 6
A
299 305anti-parallel
Strand 7
A
287 294anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
173 177first strand
Strand 2
D
143 148parallel
Strand 3
D
114 118parallel
Strand 4
D
191 197parallel
Strand 5
D
217 228parallel
Strand 6
D
299 305anti-parallel
Strand 7
D
287 294anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
173 177first strand
Strand 2
C
143 148parallel
Strand 3
C
114 118parallel
Strand 4
C
191 197parallel
Strand 5
C
217 228parallel
Strand 6
C
299 305anti-parallel
Strand 7
C
287 294anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
173 177first strand
Strand 2
B
143 148parallel
Strand 3
B
114 118parallel
Strand 4
B
191 197parallel
Strand 5
B
217 228parallel
Strand 6
B
299 306anti-parallel
Strand 7
B
286 294anti-parallel
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