Analysis of interatomic Contacts of Structural Units in PDB entry:
4OEH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OEH entry

There are 6 chains in PDB entry 4OEH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 3LYS 253
B
 THR 2LYS 253
C
 LYS 3LYS 253
D
 LYS 3LYS 253
E
 LYS 3LYS 253
F
 LYS 3ASP 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 61 helices in PDB entry 4OEH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
28 35Right-handed alpha
Helix 3
3
A
69 83Right-handed alpha
Helix 4
4
A
117 122Right-handed 310
Helix 5
5
A
132 146Right-handed alpha
Helix 6
6
A
162 166Right-handed 310
Helix 7
7
A
176 180Right-handed 310
Helix 8
8
A
181 189Right-handed alpha
Helix 9
9
A
197 207Right-handed alpha
Helix 10
10
A
229 252Right-handed alpha
Helix 11
11
B
12 16Right-handed 310
Helix 12
12
B
28 35Right-handed alpha
Helix 13
13
B
69 83Right-handed alpha
Helix 14
14
B
117 122Right-handed 310
Helix 15
15
B
132 146Right-handed alpha
Helix 16
16
B
162 166Right-handed 310
Helix 17
17
B
176 180Right-handed 310
Helix 18
18
B
181 189Right-handed alpha
Helix 19
19
B
197 207Right-handed alpha
Helix 20
20
B
232 252Right-handed alpha
Helix 21
21
C
12 16Right-handed 310
Helix 22
22
C
28 35Right-handed alpha
Helix 23
23
C
69 83Right-handed alpha
Helix 24
24
C
117 122Right-handed 310
Helix 25
25
C
132 146Right-handed alpha
Helix 26
26
C
162 166Right-handed 310
Helix 27
27
C
176 180Right-handed 310
Helix 28
28
C
181 189Right-handed alpha
Helix 29
29
C
197 207Right-handed alpha
Helix 30
30
C
229 252Right-handed alpha
Helix 31
31
D
12 16Right-handed 310
Helix 32
32
D
28 35Right-handed alpha
Helix 33
33
D
69 83Right-handed alpha
Helix 34
34
D
117 122Right-handed 310
Helix 35
35
D
132 146Right-handed alpha
Helix 36
36
D
162 166Right-handed 310
Helix 37
37
D
176 180Right-handed 310
Helix 38
38
D
181 189Right-handed alpha
Helix 39
39
D
197 207Right-handed alpha
Helix 40
40
D
229 253Right-handed alpha
Helix 41
41
E
11 16Right-handed alpha
Helix 42
42
E
28 35Right-handed alpha
Helix 43
43
E
69 83Right-handed alpha
Helix 44
44
E
117 122Right-handed 310
Helix 45
45
E
132 146Right-handed alpha
Helix 46
46
E
162 166Right-handed 310
Helix 47
47
E
176 180Right-handed 310
Helix 48
48
E
181 189Right-handed alpha
Helix 49
49
E
197 207Right-handed alpha
Helix 50
50
E
229 231Right-handed 310
Helix 51
51
E
232 252Right-handed alpha
Helix 52
52
F
12 16Right-handed 310
Helix 53
53
F
28 35Right-handed alpha
Helix 54
54
F
69 83Right-handed alpha
Helix 55
55
F
117 122Right-handed 310
Helix 56
56
F
132 146Right-handed alpha
Helix 57
57
F
162 166Right-handed 310
Helix 58
58
F
176 180Right-handed 310
Helix 59
59
F
181 189Right-handed alpha
Helix 60
60
F
197 207Right-handed alpha
Helix 61
61
F
229 253Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 4OEH. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 46first strand
Strand 2
A
49 56anti-parallel
Strand 3
A
59 64anti-parallel
Strand 4
A
20 24parallel
Strand 5
A
87 96parallel
Strand 6
A
211 221parallel
Strand 7
A
106 115anti-parallel
Strand 8
A
150 158parallel
Strand 9
A
193 195parallel
Strand 10
A
87 96anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 46first strand
Strand 2
B
49 56anti-parallel
Strand 3
B
59 64anti-parallel
Strand 4
B
20 24parallel
Strand 5
B
87 96parallel
Strand 6
B
211 221parallel
Strand 7
B
106 115anti-parallel
Strand 8
B
150 158parallel
Strand 9
B
193 195parallel
Strand 10
B
87 96anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
38 46first strand
Strand 2
C
49 56anti-parallel
Strand 3
C
59 64anti-parallel
Strand 4
C
20 22parallel
Strand 5
C
87 96parallel
Strand 6
C
211 221parallel
Strand 7
C
106 115anti-parallel
Strand 8
C
150 158parallel
Strand 9
C
193 195parallel
Strand 10
C
87 96anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
38 46first strand
Strand 2
D
49 56anti-parallel
Strand 3
D
59 64anti-parallel
Strand 4
D
20 22parallel
Strand 5
D
87 96parallel
Strand 6
D
211 221parallel
Strand 7
D
106 115anti-parallel
Strand 8
D
150 158parallel
Strand 9
D
193 195parallel
Strand 10
D
87 96anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
38 46first strand
Strand 2
E
49 56anti-parallel
Strand 3
E
59 64anti-parallel
Strand 4
E
20 24parallel
Strand 5
E
87 96parallel
Strand 6
E
211 221parallel
Strand 7
E
106 115anti-parallel
Strand 8
E
150 158parallel
Strand 9
E
193 195parallel
Strand 10
E
87 96anti-parallel
Back to list of sheets
Back to top of page

There are 10 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
38 46first strand
Strand 2
F
49 56anti-parallel
Strand 3
F
59 64anti-parallel
Strand 4
F
20 23parallel
Strand 5
F
87 96parallel
Strand 6
F
211 221parallel
Strand 7
F
106 115anti-parallel
Strand 8
F
150 158parallel
Strand 9
F
193 195parallel
Strand 10
F
87 96anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il