Analysis of interatomic Contacts of Structural Units in PDB entry:
4OES


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OES entry

There is 1 chain in PDB entry 4OES (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 1LYS 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 20 helices in PDB entry 4OES. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 32Right-handed alpha
Helix 2
2
A
78 91Right-handed alpha
Helix 3
3
A
92 97Right-handed alpha
Helix 4
4
A
99 104Right-handed alpha
Helix 5
5
A
126 131Right-handed alpha
Helix 6
6
A
141 145Right-handed 310
Helix 7
7
A
199 209Right-handed alpha
Helix 8
8
A
223 234Right-handed alpha
Helix 9
9
A
255 259Right-handed 310
Helix 10
10
A
260 271Right-handed alpha
Helix 11
11
A
272 280Right-handed alpha
Helix 12
12
A
309 319Right-handed alpha
Helix 13
13
A
348 364Right-handed alpha
Helix 14
14
A
375 386Right-handed alpha
Helix 15
15
A
402 409Right-handed alpha
Helix 16
16
A
414 421Right-handed alpha
Helix 17
17
A
425 439Right-handed alpha
Helix 18
18
A
441 459Right-handed alpha
Helix 19
19
A
476 479Right-handed 310
Helix 20
20
A
491 495Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 4OES. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
191 196parallel
Strand 3
A
173 178anti-parallel
Strand 4
A
163 169anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
44 46anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 54first strand
Strand 2
A
60 65anti-parallel
Strand 3
A
115 120anti-parallel
Strand 4
A
105 112anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
471 474anti-parallel
Strand 3
A
237 240anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
286 287first strand
Strand 2
A
462 467anti-parallel
Strand 3
A
246 251anti-parallel
Strand 4
A
390 394anti-parallel
Strand 5
A
339 345parallel
Strand 6
A
368 374parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il