Analysis of interatomic Contacts of Structural Units in PDB entry:
4OEU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OEU entry

There are 2 chains in PDB entry 4OEU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2LYS 494
B
 ILE 2LYS 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 4OEU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 23Right-handed 310
Helix 2
2
A
29 34Right-handed alpha
Helix 3
3
A
80 93Right-handed alpha
Helix 4
4
A
94 97Right-handed 310
Helix 5
5
A
100 104Right-handed 310
Helix 6
6
A
128 133Right-handed alpha
Helix 7
7
A
139 144Right-handed alpha
Helix 8
8
A
151 156Right-handed 310
Helix 9
9
A
199 209Right-handed alpha
Helix 10
10
A
218 226Right-handed 310
Helix 11
11
A
255 265Right-handed alpha
Helix 12
12
A
267 277Right-handed alpha
Helix 13
13
A
303 315Right-handed alpha
Helix 14
14
A
341 358Right-handed alpha
Helix 15
15
A
394 399Right-handed alpha
Helix 16
16
A
400 403Right-handed 310
Helix 17
17
A
418 430Right-handed alpha
Helix 18
18
A
433 451Right-handed alpha
Helix 19
19
A
479 483Right-handed 310
Helix 20
20
A
488 492Right-handed 310
Helix 21
21
B
19 23Right-handed 310
Helix 22
22
B
29 34Right-handed alpha
Helix 23
23
B
80 93Right-handed alpha
Helix 24
24
B
94 97Right-handed 310
Helix 25
25
B
100 104Right-handed 310
Helix 26
26
B
128 133Right-handed alpha
Helix 27
27
B
139 144Right-handed alpha
Helix 28
28
B
151 156Right-handed 310
Helix 29
29
B
199 209Right-handed alpha
Helix 30
30
B
218 226Right-handed 310
Helix 31
31
B
255 265Right-handed alpha
Helix 32
32
B
267 275Right-handed alpha
Helix 33
33
B
303 315Right-handed alpha
Helix 34
34
B
341 358Right-handed alpha
Helix 35
35
B
394 399Right-handed alpha
Helix 36
36
B
400 403Right-handed 310
Helix 37
37
B
418 430Right-handed alpha
Helix 38
38
B
433 451Right-handed alpha
Helix 39
39
B
479 483Right-handed 310
Helix 40
40
B
488 492Right-handed 310
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There are 12 sheets in PDB entry 4OEU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 11first strand
Strand 2
A
191 196parallel
Strand 3
A
173 178anti-parallel
Strand 4
A
163 169anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 40first strand
Strand 2
A
46 48anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 56first strand
Strand 2
A
62 67anti-parallel
Strand 3
A
117 122anti-parallel
Strand 4
A
107 114anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 216first strand
Strand 2
A
462 467anti-parallel
Strand 3
A
231 236anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
280 282first strand
Strand 2
A
454 460anti-parallel
Strand 3
A
241 246anti-parallel
Strand 4
A
379 384anti-parallel
Strand 5
A
332 338parallel
Strand 6
A
361 367parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
324 326anti-parallel
Strand 3
A
329 330anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 11first strand
Strand 2
B
191 196parallel
Strand 3
B
173 178anti-parallel
Strand 4
B
163 169anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
38 40first strand
Strand 2
B
46 48anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
51 56first strand
Strand 2
B
62 67anti-parallel
Strand 3
B
117 122anti-parallel
Strand 4
B
107 114anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
214 216first strand
Strand 2
B
462 467anti-parallel
Strand 3
B
231 236anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
280 282first strand
Strand 2
B
454 460anti-parallel
Strand 3
B
241 246anti-parallel
Strand 4
B
379 384anti-parallel
Strand 5
B
332 338parallel
Strand 6
B
361 367parallel
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There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 318first strand
Strand 2
B
324 326anti-parallel
Strand 3
B
329 330anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il