Analysis of interatomic Contacts of Structural Units in PDB entry:
4OFC

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 4OFC entry

There are 6 chains in PDB entry 4OFC (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MET 1	PHE 335
B	MET 1	PHE 335
C	MET 1	PHE 335
D	MET 1	PHE 335
E	MET 1	PHE 335
F	MET 1	PHE 335

There are123 helices in PDB entry 4OFC. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	16	22	Right-handed alpha
Helix 2	2	A	52	54	Right-handed 310
Helix 3	3	A	55	67	Right-handed alpha
Helix 4	4	A	76	81	Right-handed 310
Helix 5	5	A	85	107	Right-handed alpha
Helix 6	6	A	121	135	Right-handed alpha
Helix 7	7	A	154	156	Right-handed 310
Helix 8	8	A	157	168	Right-handed alpha
Helix 9	9	A	181	186	Right-handed 310
Helix 10	10	A	188	193	Right-handed alpha
Helix 11	11	A	193	208	Right-handed alpha
Helix 12	12	A	210	215	Right-handed alpha
Helix 13	13	A	224	227	Right-handed 310
Helix 14	14	A	228	243	Right-handed alpha
Helix 15	15	A	243	248	Right-handed alpha
Helix 16	16	A	254	259	Right-handed 310
Helix 17	17	A	270	282	Right-handed alpha
Helix 18	18	A	302	308	Right-handed alpha
Helix 19	19	A	312	321	Right-handed alpha
Helix 20	20	A	321	329	Right-handed alpha
Helix 21	21	A	331	335	Right-handed 310
Helix 22	22	B	16	22	Right-handed alpha
Helix 23	23	B	52	54	Right-handed 310
Helix 24	24	B	55	67	Right-handed alpha
Helix 25	25	B	76	81	Right-handed 310
Helix 26	26	B	85	107	Right-handed alpha
Helix 27	27	B	121	135	Right-handed alpha
Helix 28	28	B	154	156	Right-handed 310
Helix 29	29	B	157	168	Right-handed alpha
Helix 30	30	B	181	186	Right-handed 310
Helix 31	31	B	188	193	Right-handed alpha
Helix 32	32	B	193	209	Right-handed alpha
Helix 33	33	B	210	215	Right-handed alpha
Helix 34	34	B	224	227	Right-handed 310
Helix 35	35	B	228	243	Right-handed alpha
Helix 36	36	B	243	248	Right-handed alpha
Helix 37	37	B	254	259	Right-handed 310
Helix 38	38	B	270	282	Right-handed alpha
Helix 39	39	B	302	307	Right-handed alpha
Helix 40	40	B	312	321	Right-handed alpha
Helix 41	41	B	321	329	Right-handed alpha
Helix 42	42	B	331	335	Right-handed 310
Helix 43	43	C	16	22	Right-handed alpha
Helix 44	44	C	52	54	Right-handed 310
Helix 45	45	C	55	67	Right-handed alpha
Helix 46	46	C	76	81	Right-handed 310
Helix 47	47	C	85	107	Right-handed alpha
Helix 48	48	C	121	135	Right-handed alpha
Helix 49	49	C	154	156	Right-handed 310
Helix 50	50	C	157	168	Right-handed alpha
Helix 51	51	C	181	186	Right-handed 310
Helix 52	52	C	188	193	Right-handed alpha
Helix 53	53	C	193	209	Right-handed alpha
Helix 54	54	C	210	215	Right-handed alpha
Helix 55	55	C	224	227	Right-handed 310
Helix 56	56	C	228	243	Right-handed alpha
Helix 57	57	C	243	248	Right-handed alpha
Helix 58	58	C	254	259	Right-handed 310
Helix 59	59	C	270	282	Right-handed alpha
Helix 60	60	C	302	307	Right-handed alpha
Helix 61	61	C	312	321	Right-handed alpha
Helix 62	62	C	321	329	Right-handed alpha
Helix 63	63	D	16	22	Right-handed alpha
Helix 64	64	D	52	54	Right-handed 310
Helix 65	65	D	55	66	Right-handed alpha
Helix 66	66	D	76	81	Right-handed 310
Helix 67	67	D	85	107	Right-handed alpha
Helix 68	68	D	121	135	Right-handed alpha
Helix 69	69	D	154	156	Right-handed 310
Helix 70	70	D	157	168	Right-handed alpha
Helix 71	71	D	181	186	Right-handed 310
Helix 72	72	D	188	193	Right-handed alpha
Helix 73	73	D	193	209	Right-handed alpha
Helix 74	74	D	210	215	Right-handed alpha
Helix 75	75	D	224	227	Right-handed 310
Helix 76	76	D	228	243	Right-handed alpha
Helix 77	77	D	243	248	Right-handed alpha
Helix 78	78	D	254	259	Right-handed 310
Helix 79	79	D	270	282	Right-handed alpha
Helix 80	80	D	302	308	Right-handed alpha
Helix 81	81	D	312	321	Right-handed alpha
Helix 82	82	D	321	329	Right-handed alpha
Helix 83	83	E	16	22	Right-handed alpha
Helix 84	84	E	52	54	Right-handed 310
Helix 85	85	E	55	67	Right-handed alpha
Helix 86	86	E	76	81	Right-handed 310
Helix 87	87	E	85	107	Right-handed alpha
Helix 88	88	E	121	135	Right-handed alpha
Helix 89	89	E	154	156	Right-handed 310
Helix 90	90	E	157	168	Right-handed alpha
Helix 91	91	E	181	185	Right-handed 310
Helix 92	92	E	188	193	Right-handed alpha
Helix 93	93	E	193	209	Right-handed alpha
Helix 94	94	E	210	215	Right-handed alpha
Helix 95	95	E	224	227	Right-handed 310
Helix 96	96	E	228	243	Right-handed alpha
Helix 97	97	E	243	248	Right-handed alpha
Helix 98	98	E	254	259	Right-handed 310
Helix 99	99	E	270	282	Right-handed alpha
Helix 100	100	E	302	308	Right-handed alpha
Helix 101	101	E	312	321	Right-handed alpha
Helix 102	102	E	321	329	Right-handed alpha
Helix 103	103	F	16	22	Right-handed alpha
Helix 104	104	F	52	54	Right-handed 310
Helix 105	105	F	55	67	Right-handed alpha
Helix 106	106	F	76	81	Right-handed 310
Helix 107	107	F	85	107	Right-handed alpha
Helix 108	108	F	121	135	Right-handed alpha
Helix 109	109	F	154	156	Right-handed 310
Helix 110	110	F	157	168	Right-handed alpha
Helix 111	111	F	181	185	Right-handed 310
Helix 112	112	F	188	193	Right-handed alpha
Helix 113	113	F	193	209	Right-handed alpha
Helix 114	114	F	210	215	Right-handed alpha
Helix 115	115	F	224	227	Right-handed 310
Helix 116	116	F	228	243	Right-handed alpha
Helix 117	117	F	243	248	Right-handed alpha
Helix 118	118	F	254	259	Right-handed 310
Helix 119	119	F	270	281	Right-handed alpha
Helix 120	120	F	302	307	Right-handed alpha
Helix 121	121	F	312	321	Right-handed alpha
Helix 122	122	F	321	329	Right-handed alpha
Helix 123	123	F	331	335	Right-handed 310

There are 18 sheets in PDB entry 4OFC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	3	8	first strand
Strand 2	A	70	74	parallel
Strand 3	A	111	115	parallel
Strand 4	A	140	144	parallel
Strand 5	A	170	174	parallel
Strand 6	A	220	222	parallel
Strand 7	A	263	265	parallel
Strand 8	A	286	287	parallel

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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	27	33	first strand
Strand 2	A	36	41	anti-parallel
Strand 3	A	44	50	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	146	147	first strand
Strand 2	A	150	151	anti-parallel

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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	3	8	first strand
Strand 2	B	70	74	parallel
Strand 3	B	111	115	parallel
Strand 4	B	140	144	parallel
Strand 5	B	170	174	parallel
Strand 6	B	220	222	parallel
Strand 7	B	263	265	parallel
Strand 8	B	286	287	parallel

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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	27	31	first strand
Strand 2	B	36	41	anti-parallel
Strand 3	B	44	50	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	146	147	first strand
Strand 2	B	150	151	anti-parallel

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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	3	8	first strand
Strand 2	C	70	74	parallel
Strand 3	C	111	115	parallel
Strand 4	C	140	144	parallel
Strand 5	C	170	174	parallel
Strand 6	C	220	222	parallel
Strand 7	C	263	265	parallel
Strand 8	C	286	287	parallel

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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	28	30	first strand
Strand 2	C	36	40	anti-parallel
Strand 3	C	45	50	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	146	147	first strand
Strand 2	C	150	151	anti-parallel

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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	3	8	first strand
Strand 2	D	70	74	parallel
Strand 3	D	111	115	parallel
Strand 4	D	140	144	parallel
Strand 5	D	170	174	parallel
Strand 6	D	220	222	parallel
Strand 7	D	263	265	parallel
Strand 8	D	286	287	parallel

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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	27	33	first strand
Strand 2	D	36	41	anti-parallel
Strand 3	D	45	50	anti-parallel

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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	146	147	first strand
Strand 2	D	150	151	anti-parallel

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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3	8	first strand
Strand 2	E	70	74	parallel
Strand 3	E	111	115	parallel
Strand 4	E	140	144	parallel
Strand 5	E	170	174	parallel
Strand 6	E	220	222	parallel
Strand 7	E	263	265	parallel
Strand 8	E	286	287	parallel

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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	28	33	first strand
Strand 2	E	36	41	anti-parallel
Strand 3	E	44	50	anti-parallel

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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	146	147	first strand
Strand 2	E	150	151	anti-parallel

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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	3	8	first strand
Strand 2	F	70	74	parallel
Strand 3	F	111	115	parallel
Strand 4	F	140	144	parallel
Strand 5	F	170	174	parallel
Strand 6	F	220	222	parallel
Strand 7	F	263	265	parallel
Strand 8	F	286	287	parallel

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There are 3 strands in Q sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	27	31	first strand
Strand 2	F	36	41	anti-parallel
Strand 3	F	44	50	anti-parallel

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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	146	147	first strand
Strand 2	F	150	151	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 4OFC

Analysis of interatomic Contacts of Structural Units in PDB entry:
4OFC