Analysis of interatomic Contacts of Structural Units in PDB entry:
4OFN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OFN entry

There are 2 chains in PDB entry 4OFN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1PHE 206
B
 VAL 2PHE 206
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 4OFN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 14Right-handed 310
Helix 2
2
A
15 25Right-handed alpha
Helix 3
3
A
35 43Right-handed alpha
Helix 4
4
A
44 46Right-handed 310
Helix 5
5
A
63 76Right-handed alpha
Helix 6
6
A
81 102Right-handed alpha
Helix 7
7
A
102 110Right-handed alpha
Helix 8
8
A
116 124Right-handed alpha
Helix 9
9
A
124 142Right-handed alpha
Helix 10
10
A
154 171Right-handed alpha
Helix 11
11
A
178 190Right-handed alpha
Helix 12
12
A
191 201Right-handed alpha
Helix 13
13
B
12 14Right-handed 310
Helix 14
14
B
15 25Right-handed alpha
Helix 15
15
B
35 43Right-handed alpha
Helix 16
16
B
44 46Right-handed 310
Helix 17
17
B
63 76Right-handed alpha
Helix 18
18
B
81 102Right-handed alpha
Helix 19
19
B
102 110Right-handed alpha
Helix 20
20
B
116 124Right-handed alpha
Helix 21
21
B
124 142Right-handed alpha
Helix 22
22
B
154 171Right-handed alpha
Helix 23
23
B
178 190Right-handed alpha
Helix 24
24
B
191 201Right-handed alpha
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There are 2 sheets in PDB entry 4OFN. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 34first strand
Strand 2
A
4 9parallel
Strand 3
A
53 56anti-parallel
Strand 4
A
59 62anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 34first strand
Strand 2
B
4 9parallel
Strand 3
B
53 56anti-parallel
Strand 4
B
59 62anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il