Analysis of interatomic Contacts of Structural Units in PDB entry:
4OFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OFX entry

There is 1 chain in PDB entry 4OFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 316
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 4OFX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 10Right-handed 310
Helix 2
2
A
20 25Right-handed 310
Helix 3
3
A
34 37Right-handed 310
Helix 4
4
A
43 57Right-handed alpha
Helix 5
5
A
76 86Right-handed alpha
Helix 6
6
A
98 108Right-handed alpha
Helix 7
7
A
126 138Right-handed alpha
Helix 8
8
A
151 159Right-handed alpha
Helix 9
9
A
159 169Right-handed alpha
Helix 10
10
A
182 196Right-handed alpha
Helix 11
11
A
246 262Right-handed alpha
Helix 12
12
A
266 280Right-handed alpha
Helix 13
13
A
281 283Right-handed 310
Helix 14
14
A
296 301Right-handed 310
Helix 15
15
A
306 313Right-handed alpha
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There are 2 sheets in PDB entry 4OFX. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 17first strand
Strand 2
A
28 32anti-parallel
Strand 3
A
288 292parallel
Strand 4
A
174 178parallel
Strand 5
A
200 206parallel
Strand 6
A
241 245parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
111 115first strand
Strand 2
A
88 94parallel
Strand 3
A
65 69parallel
Strand 4
A
141 143parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il