Analysis of interatomic Contacts of Structural Units in PDB entry:
4OFZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OFZ entry

There is 1 chain in PDB entry 4OFZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 63GLY 491
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 4OFZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 88Right-handed alpha
Helix 2
2
A
93 108Right-handed alpha
Helix 3
3
A
130 152Right-handed alpha
Helix 4
4
A
158 166Right-handed alpha
Helix 5
5
A
167 173Right-handed alpha
Helix 6
6
A
179 205Right-handed alpha
Helix 7
7
A
231 246Right-handed alpha
Helix 8
8
A
261 266Right-handed alpha
Helix 9
9
A
279 281Right-handed 310
Helix 10
10
A
299 317Right-handed alpha
Helix 11
11
A
350 365Right-handed alpha
Helix 12
12
A
397 409Right-handed alpha
Helix 13
13
A
425 427Right-handed 310
Helix 14
14
A
428 439Right-handed alpha
Helix 15
15
A
451 462Right-handed alpha
Helix 16
16
A
473 491Right-handed alpha
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There are 3 sheets in PDB entry 4OFZ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
118 120first strand
Strand 2
A
125 127anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 292first strand
Strand 2
A
283 286anti-parallel
Strand 3
A
274 278anti-parallel
Strand 4
A
248 252parallel
Strand 5
A
209 213parallel
Strand 6
A
419 423parallel
Strand 7
A
444 448parallel
Strand 8
A
468 471parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
337 341anti-parallel
Strand 3
A
384 388anti-parallel
Strand 4
A
376 378anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il