Analysis of interatomic Contacts of Structural Units in PDB entry:
4OGP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OGP entry

There are 2 chains in PDB entry 4OGP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 474LYS 796
B
 GLY 473LYS 796
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 35 helices in PDB entry 4OGP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
474 498Right-handed alpha
Helix 2
2
A
504 511Right-handed alpha
Helix 3
3
A
521 527Right-handed alpha
Helix 4
4
A
529 535Right-handed alpha
Helix 5
5
A
535 542Right-handed alpha
Helix 6
6
A
544 559Right-handed alpha
Helix 7
7
A
562 569Right-handed alpha
Helix 8
8
A
577 600Right-handed alpha
Helix 9
9
A
604 618Right-handed alpha
Helix 10
10
A
620 626Right-handed alpha
Helix 11
11
A
627 643Right-handed alpha
Helix 12
12
A
655 674Right-handed alpha
Helix 13
13
A
676 681Right-handed 310
Helix 14
14
A
683 694Right-handed alpha
Helix 15
15
A
701 714Right-handed alpha
Helix 16
16
A
716 727Right-handed alpha
Helix 17
17
A
727 750Right-handed alpha
Helix 18
18
A
755 783Right-handed alpha
Helix 19
19
B
474 498Right-handed alpha
Helix 20
20
B
504 511Right-handed alpha
Helix 21
21
B
521 527Right-handed alpha
Helix 22
22
B
529 542Right-handed alpha
Helix 23
23
B
544 559Right-handed alpha
Helix 24
24
B
562 569Right-handed alpha
Helix 25
25
B
577 601Right-handed alpha
Helix 26
26
B
604 619Right-handed alpha
Helix 27
27
B
620 625Right-handed alpha
Helix 28
28
B
627 646Right-handed alpha
Helix 29
29
B
655 674Right-handed alpha
Helix 30
30
B
676 681Right-handed 310
Helix 31
31
B
683 695Right-handed alpha
Helix 32
32
B
701 714Right-handed alpha
Helix 33
33
B
716 727Right-handed alpha
Helix 34
34
B
727 750Right-handed alpha
Helix 35
35
B
755 783Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 4OGP. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
785 788first strand
Strand 2
A
791 794anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
785 788first strand
Strand 2
B
791 794anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il