Analysis of interatomic Contacts of Structural Units in PDB entry:
4OH7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OH7 entry

There are 2 chains in PDB entry 4OH7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
GLY 6ASP 307
B
GLY 6ASP 307
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 29 helices in PDB entry 4OH7. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
12 16Right-handed 310
Helix 2
2
A
17 37Right-handed alpha
Helix 3
3
A
57 71Right-handed alpha
Helix 4
4
A
90 102Right-handed alpha
Helix 5
5
A
111 122Right-handed alpha
Helix 6
6
A
135 151Right-handed alpha
Helix 7
7
A
165 178Right-handed alpha
Helix 8
8
A
194 203Right-handed alpha
Helix 9
9
A
212 218Right-handed alpha
Helix 10
10
A
235 244Right-handed alpha
Helix 11
11
A
245 247Right-handed 310
Helix 12
12
A
249 254Right-handed alpha
Helix 13
13
A
275 280Right-handed alpha
Helix 14
14
A
285 306Right-handed alpha
Helix 15
15
B
12 16Right-handed 310
Helix 16
16
B
17 37Right-handed alpha
Helix 17
17
B
57 71Right-handed alpha
Helix 18
18
B
80 84Right-handed alpha
Helix 19
19
B
90 102Right-handed alpha
Helix 20
20
B
111 122Right-handed alpha
Helix 21
21
B
135 151Right-handed alpha
Helix 22
22
B
165 178Right-handed alpha
Helix 23
23
B
195 203Right-handed alpha
Helix 24
24
B
212 218Right-handed alpha
Helix 25
25
B
235 244Right-handed alpha
Helix 26
26
B
245 247Right-handed 310
Helix 27
27
B
249 254Right-handed alpha
Helix 28
28
B
275 280Right-handed alpha
Helix 29
29
B
285 306Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 4OH7. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
74 79first strand
Strand 2
A
48 53parallel
Strand 3
A
104 108parallel
Strand 4
A
126 130parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
206 210first strand
Strand 2
A
181 185parallel
Strand 3
A
157 161parallel
Strand 4
A
222 225parallel
Strand 5
A
261 264parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
74 79first strand
Strand 2
B
48 53parallel
Strand 3
B
104 108parallel
Strand 4
B
126 130parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
206 210first strand
Strand 2
B
181 185parallel
Strand 3
B
157 161parallel
Strand 4
B
222 225parallel
Strand 5
B
261 264parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il