Analysis of interatomic Contacts of Structural Units in PDB entry:
4OIE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OIE entry

There is 1 chain in PDB entry 4OIE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 176ALA 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 3 helices in PDB entry 4OIE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
226 230Right-handed 310
Helix 2
2
A
237 241Right-handed 310
Helix 3
3
A
244 248Right-handed 310
Back to top of page

There are 2 sheets in PDB entry 4OIE. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 189first strand
Strand 2
A
192 197anti-parallel
Strand 3
A
200 206anti-parallel
Strand 4
A
210 217anti-parallel
Strand 5
A
273 277anti-parallel
Strand 6
A
321 325anti-parallel
Strand 7
A
328 331anti-parallel
Strand 8
A
298 299anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
284 287first strand
Strand 2
A
310 313parallel
Strand 3
A
335 337anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il