Analysis of interatomic Contacts of Structural Units in PDB entry:
4OJJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 4OJJ entry

There are 3 chains in PDB entry 4OJJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 LYS 476HIS 798
A
 GLY 474TYR 787
B
 GLU 480LEU 795
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 53 helices in PDB entry 4OJJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
476 498Right-handed alpha
Helix 2
2
C
504 512Right-handed alpha
Helix 3
3
C
521 527Right-handed alpha
Helix 4
4
C
529 541Right-handed alpha
Helix 5
5
C
544 558Right-handed alpha
Helix 6
6
C
559 561Right-handed 310
Helix 7
7
C
562 569Right-handed alpha
Helix 8
8
C
577 603Right-handed alpha
Helix 9
9
C
604 619Right-handed alpha
Helix 10
10
C
620 626Right-handed alpha
Helix 11
11
C
627 650Right-handed alpha
Helix 12
12
C
655 674Right-handed alpha
Helix 13
13
C
676 681Right-handed 310
Helix 14
14
C
683 694Right-handed alpha
Helix 15
15
C
701 714Right-handed alpha
Helix 16
16
C
716 727Right-handed alpha
Helix 17
17
C
727 750Right-handed alpha
Helix 18
18
C
755 783Right-handed alpha
Helix 19
19
A
476 499Right-handed alpha
Helix 20
20
A
504 511Right-handed alpha
Helix 21
21
A
521 527Right-handed alpha
Helix 22
22
A
529 535Right-handed alpha
Helix 23
23
A
535 541Right-handed alpha
Helix 24
24
A
544 559Right-handed alpha
Helix 25
25
A
562 569Right-handed alpha
Helix 26
26
A
577 601Right-handed alpha
Helix 27
27
A
604 618Right-handed alpha
Helix 28
28
A
620 625Right-handed alpha
Helix 29
29
A
627 651Right-handed alpha
Helix 30
30
A
656 674Right-handed alpha
Helix 31
31
A
676 681Right-handed 310
Helix 32
32
A
683 695Right-handed alpha
Helix 33
33
A
701 715Right-handed alpha
Helix 34
34
A
716 727Right-handed alpha
Helix 35
35
A
727 750Right-handed alpha
Helix 36
36
A
755 781Right-handed alpha
Helix 37
37
B
482 487Right-handed alpha
Helix 38
38
B
524 529Right-handed 310
Helix 39
39
B
530 535Right-handed alpha
Helix 40
40
B
535 543Right-handed alpha
Helix 41
41
B
544 558Right-handed alpha
Helix 42
42
B
562 569Right-handed alpha
Helix 43
43
B
579 601Right-handed alpha
Helix 44
44
B
604 618Right-handed alpha
Helix 45
45
B
620 625Right-handed alpha
Helix 46
46
B
627 648Right-handed alpha
Helix 47
47
B
649 656Right-handed alpha
Helix 48
48
B
656 674Right-handed alpha
Helix 49
49
B
677 681Right-handed 310
Helix 50
50
B
683 694Right-handed alpha
Helix 51
51
B
701 715Right-handed alpha
Helix 52
52
B
716 750Right-handed alpha
Helix 53
53
B
755 783Right-handed alpha
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There are 2 sheets in PDB entry 4OJJ. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
785 788first strand
Strand 2
C
791 794anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
785 788first strand
Strand 2
B
791 794anti-parallel
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